| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5061 |
|---|
| Symbol | rpmD |
|---|
| ID | 3714164 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 5696855 |
|---|
| End bp | 5697031 |
|---|
| Gene Length | 177 bp |
|---|
| Protein Length | 58 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | 50S ribosomal protein L30 |
|---|
| Protein accession | YP_350789 |
|---|
| Protein GI | 77461282 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00000009319 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.126935 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTACCG TTAAAGTTAC GCTGATCAAA AGCATGACCG GCCGCATCCC TAACCACAAA
CTGTGCGTTA AGGGTCTGGG TCTGCGTCGC ATCGGTCACA CTGTAGAAGT CCAGGATACT
CCCGAGAATC GCGGGATGAT CAACAAGGCT TACTACATGC TGCGTGTCGA GGGTTAA
|
|---|
| Protein sequence | MATVKVTLIK SMTGRIPNHK LCVKGLGLRR IGHTVEVQDT PENRGMINKA YYMLRVEG
|
|---|
| |