Gene Pfl01_5058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5058 
SymbolrpsM 
ID3714161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5694454 
End bp5694810 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content54% 
IMG OID 
Product30S ribosomal protein S13 
Protein accessionYP_350786 
Protein GI77461279 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000365808 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.238672 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGTA TTGCAGGCGT TAACATTCCA GATAACAAGC ATACTGTTAT CTCGCTGACC 
TACATCTATG GTGTTGGTCG CACTACTGCA CAGAAGATCT GTGCAGAGAC TGGGGTAAAC
CCAGCCGCAA AGATCAAGGA TCTGAGCGAC GAGCAGATTG AACAGCTGCG TGGCGAAGTG
GCGAAGTTCA CCACTGAAGG TGACCTGCGT CGCGAAATCA ACATGAAAAT CAAGCGCTTG
ATGGACCTCG GTTGCTATCG CGGTCTGCGT CATCGTCGTG GTCTGCCAGT ACGCGGTCAG
CGTACCAAGA CCAACGCGCG TACCCGTAAA GGTCCGCGTA AGCCGATCCG CAAGTAA
 
Protein sequence
MARIAGVNIP DNKHTVISLT YIYGVGRTTA QKICAETGVN PAAKIKDLSD EQIEQLRGEV 
AKFTTEGDLR REINMKIKRL MDLGCYRGLR HRRGLPVRGQ RTKTNARTRK GPRKPIRK