Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5050 |
Symbol | |
ID | 3713706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5685139 |
End bp | 5686536 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | general substrate transporter |
Protein accession | YP_350778 |
Protein GI | 77461271 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0243206 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGATC CCCACAGCGA ACGCATGAGT GGCAGCGAGA CCCGCGCGGC GAGCGGTCTG GCCCTGGTGT TCGCCTTCCG TATGCTTGGC ATGTTCATGG TGTTGCCGGT ACTGGCGACC TACGGCATGG ATCTGGCGGG AGCGACCCCG GCCCTGATCG GGCTGGCGAT CGGCGCTTAC GGCCTGACCC AGGCGATTTT TCAGATTCCG TTCGGGATCA TTTCCGACCG CATCGGCCGG CGTCCGGTGA TTTACCTGGG GCTGATCGTC TTCGCCCTTG GCAGCGTGCT GGCGGCTCAG GCCGATTCGA TCTGGGGCGT GATTGCCGGG CGGATCCTGC AGGGCGCCGG CGCTATTTCT GCGGCAGTCA TGGCGTTGCT TTCCGACCTG ACCCGCGAAC AGCACCGCAC CAAGGCCATG GCCATGATTG GCATGACCAT CGGCCTGTCG TTCGCCGTAG CGATGGTGGT CGGCCCGCTG CTGACCCGTG CGTTCGGCTT GTCCGGTCTG TTTCTGGCTA CGGGCGGCAT GGCGCTGGTA GGGATCGTGA TCGTGATGTT CATGGTGCCG AAATCCACCG GGCCGCTGAG CCACCGCGAG TCCGGCGTTG CACGTCAGGC GTTGATGCCG ACGCTCAAGC ACCCGGACCT GCTGCGGCTG GACCTGGGCA TTTTTGTGTT ACATGCGATG TTGATGTCGA GCTTCGTCGC ACTGCCCCTG GCGCTGGTCG AAAAGGCCGG TCTGCCCAAG GAACAGCACT GGTGGGTCTA CCTCACCGCG CTGCTGATTT CTTTCTTCGC CATGATTCCG TTCATTATCT ACGGCGAGAA GAAACGCAAA ATGAAACGAG TTTTGCTCGG TGCCGTGATG ACGCTGATGC TGACTGAGCT ATTCTTCTGG CAGTTCGGTG ACAGCCTGCG GGCTCTGGTG ATCGGGACGG TGGTGTTCTT CACCGCGTTC AATCTGCTGG AAGCATCGCT GCCGTCACTG ATCAGCAAGG TTTCACCGGC AGGTGGCAAA GGCACGGCCA TGGGCGTGTA CTCCACCAGT CAGTTCCTCG GTTCGGCACT CGGCGGGATT CTCGGCGGCT GGATGTTCCA GCATGGCGGT CTGTCGGTTG TGTTCCTCGG ATGTGCCGGG CTGGCTGCAC TTTGGCTGGC CTTTGCTGTT ACCATGCGCG AACCTCCCTA CGTGACGAGC CTGCGCCTGC CGCTGTCGCC CGAAGCGATC CGCGAAGCGG GTCTGGTCGA GCGTCTCAAG GCCCTCGTAG GGGTAACTGA TGCAGTGATA GTCGCTGATG AAGCGGCGAT CTACATCAAA CTGGACACCG AATTAATGGA TCGCACCACT CTCGAACGCC TGGTGAACAA CCCGGCGCAG ACTGCGTGCG AAGCCTAG
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Protein sequence | MHDPHSERMS GSETRAASGL ALVFAFRMLG MFMVLPVLAT YGMDLAGATP ALIGLAIGAY GLTQAIFQIP FGIISDRIGR RPVIYLGLIV FALGSVLAAQ ADSIWGVIAG RILQGAGAIS AAVMALLSDL TREQHRTKAM AMIGMTIGLS FAVAMVVGPL LTRAFGLSGL FLATGGMALV GIVIVMFMVP KSTGPLSHRE SGVARQALMP TLKHPDLLRL DLGIFVLHAM LMSSFVALPL ALVEKAGLPK EQHWWVYLTA LLISFFAMIP FIIYGEKKRK MKRVLLGAVM TLMLTELFFW QFGDSLRALV IGTVVFFTAF NLLEASLPSL ISKVSPAGGK GTAMGVYSTS QFLGSALGGI LGGWMFQHGG LSVVFLGCAG LAALWLAFAV TMREPPYVTS LRLPLSPEAI REAGLVERLK ALVGVTDAVI VADEAAIYIK LDTELMDRTT LERLVNNPAQ TACEA
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