Gene Pfl01_5048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5048 
Symbol 
ID3713704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5683378 
End bp5684535 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content60% 
IMG OID 
Productglutathionylspermidine synthase 
Protein accessionYP_350776 
Protein GI77461269 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.875853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0509044 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGA TCCACTGCGC CGAGCGCCAC GACTGGAAGC AGACCGCCGA AAGCCTCGGC 
TTTCTGTTTC ATACCATCGA CGACGAGCCG TACTGGGACG AGCGCGCCTA TTACCAGTTC
ACGCTCGCAC AGATCGAAAA CGATCTGGAG GATCCAACCA CCGAGCTGCA CGAGATGTGC
ATGGACCTGG TCGACCGCGT CGTGCACAGC GAAGAACTGC TGGGTCGCCT GAGCATTCCG
GCGTCGTACT ACGACATGAT CCGAACGTCC TGGCTGGAAG GTCATCCGCA TCTGTACGGG
CGCATGGACT TCTCCTACAG CGGCAATGGC CCGGCGAAGC TGCTCGAGCT CAACTACGAC
ACGCCCACGA GTCTTTACGA AGCGTCGGCG TTCCAGTGGG GCTGGCTGGA GCAATGCATC
GAGCGCGGGA TGCTGCCGCG CCATGCCGAC CAGTTCAACA GCATCGACAC CCGGCTGCAC
GAAGCCTTTG CCCACCTGAA ACTCACGCGG CCGTTTTACT TCGCCTCGAT GAAAGACTCG
GTCGAAGACA AGGGCACCAC GGATTACCTG CGGCTGATCG CAGAAAAGGT CGGCATCGAA
TCGCGGCACA TCGATATCGA AGACATTGGC CTGAGCGCTG ACGGTCGTTT CGTGGATCTC
GAGGATCGCT GGATCCCGCA CCTGTTCAAA CTGCACGCCT GGGAGTTCAT CTTCCACGAA
CCGTTCGGCG CGGCGATCGC CGAATGCGAC ACCCAGTTTT TCGAACCGGC GTGGAAATCC
ATTCTCTCCA ACAAGGGCGC CTTGCCGTTG CTTTGGGAAC TGCACAAGGG TCATCCGAAC
CTGCTCGCCG CACATCTCGA TCCGAATCCG GGCAGCGCGG TGCCCAAGGG CTGGGTACGC
AAGCCGTACT TCTCCCGGGA AGGTGCCAAC ATCGAGTTGC AGACAGCCGA AGGCCTGATC
GTCAAAGAGG ATGGGCCCTA CACCGACGCG CCCTTCATCC TTCAGGAACT TGCCCCGTTG
CCGAAGTTCG ACGACAGCTA CACGCTGATC GGCTCCTGGG TGATCGGCGA TCAGGCGGCG
GGGATTGGCG TGCGCGAAGA CAACAGCCTG ATCACCAAGG ATTCGAGTCG GTTCCTGCCG
CATCTGATTC TTGACTGA
 
Protein sequence
MKKIHCAERH DWKQTAESLG FLFHTIDDEP YWDERAYYQF TLAQIENDLE DPTTELHEMC 
MDLVDRVVHS EELLGRLSIP ASYYDMIRTS WLEGHPHLYG RMDFSYSGNG PAKLLELNYD
TPTSLYEASA FQWGWLEQCI ERGMLPRHAD QFNSIDTRLH EAFAHLKLTR PFYFASMKDS
VEDKGTTDYL RLIAEKVGIE SRHIDIEDIG LSADGRFVDL EDRWIPHLFK LHAWEFIFHE
PFGAAIAECD TQFFEPAWKS ILSNKGALPL LWELHKGHPN LLAAHLDPNP GSAVPKGWVR
KPYFSREGAN IELQTAEGLI VKEDGPYTDA PFILQELAPL PKFDDSYTLI GSWVIGDQAA
GIGVREDNSL ITKDSSRFLP HLILD