Gene Pfl01_5036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5036 
Symbol 
ID3713692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5673163 
End bp5673960 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content61% 
IMG OID 
Productaminoacyl-tRNA hydrolase 
Protein accessionYP_350764 
Protein GI77461257 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0185176 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATTC CCGAGCCGCT CGGCTTCACC GACGAGCAGT CCACGGTCAT CACCACGGTG 
CGCCGTTTCA CCGTGCTGAC GGTCAACACC CACAAGGGTT TCACCGCACT GAACCGGCGT
TTCATCCTGC CGGAACTGCG CGAAGCGGTG CGCAGCGTGT CCGCCGATGT GGTGTTTCTT
CAGGAAGTCC ACGGCACCCA CGAACATCAT CCCAAGCGCT ACAACAATTG GCCGACGATG
CCGCAGTACG AATTTCTCGC CGACAGTCTC TGGCCGCAGT TCGCCTACGG GCGCAACGCC
GTGTACCCGG AGGGCGATCA TGGCAATGCA GTGCTGTCGA AATTCCAGAT CGTGCGCCAT
GACAACCTCG ACGTTTCGAT CAGCGGCCAT GAAAACCGGG GGCTGCTGCA CTGTGTGCTG
CGCCTGCCGG GAGACGACCG TGAAGTACAT GCGATCTGCG TCCACCTGGG CCTGCGCGAA
AGCCATCGCA ACGCTCAGTT GGCTCTGCTG AAAAAGCGCC TGGCCGAACT GCCCGAGGAT
GCGCCGGTGA TCGTCGCCGG CGATTTCAAC GACTGGCGCC AGCGCGCCGA TGCCTTGCTT
GAACCCTGTG GCCTGCGTGA AGTGTTTGCG GCGCATCACG GCCGGTCGGC ACGCAGTTTT
CCCGCACGTC TGCCATTGCT GCGCCTGGAC CGGATCTACG TAAGCAACCT CAAGGCCAGT
CAGCCAAAAG TACTGGCGAA CCGTCCCTGG TCACACCTTT CCGACCACGC ACCGCTATCG
GTGGAGATTG AACTATGA
 
Protein sequence
MSIPEPLGFT DEQSTVITTV RRFTVLTVNT HKGFTALNRR FILPELREAV RSVSADVVFL 
QEVHGTHEHH PKRYNNWPTM PQYEFLADSL WPQFAYGRNA VYPEGDHGNA VLSKFQIVRH
DNLDVSISGH ENRGLLHCVL RLPGDDREVH AICVHLGLRE SHRNAQLALL KKRLAELPED
APVIVAGDFN DWRQRADALL EPCGLREVFA AHHGRSARSF PARLPLLRLD RIYVSNLKAS
QPKVLANRPW SHLSDHAPLS VEIEL