Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5030 |
Symbol | |
ID | 3713764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5662356 |
End bp | 5663285 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_350758 |
Protein GI | 77461251 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.446377 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAAG GCCCTGTTCT CATCACCGGC GGCGCCGGTT TCATCGGCTC GCACCTGACT GACGCGCTGC TTGCAAAGGG CCATTCGGTG CGGATTCTCG ATGATCTGTC GACCGGCAAG CGCAGCAACC TGCCGCTGGA TAATCCCAAG GTCGAACTGA TCGTCGGCGA TGTGGCCGAT GCTGCTCTGG TCGCACAAGC GATGCAGGGT TGCAGCGCGG TCGCCCATCT GGCCGCCGTC GCTTCGGTGC AGGCGTCGGT GGACGATCCG GTGAAAACCC ACCAGAGCAA TTTCATCGGC ACGCTGAACG TCTGCGAAGC CATGCGCGAG GCCGGCGTGA AGCGTGTGTT GTACGCCTCC AGCGCAGCGG TCTACGGCAA CAATGGCGAA GGCGAGTCGA TTGACGAAGA CACGCCCAAG GCACCGCTGA CGCCTTACGC GTCGGACAAA CTGGCCGGCG AGCAGTACTT CGATTTCTAC CGCCGCCAGC ACGGTCTGGA ACCGGCGATC TTCCGTTTCT TCAACATCTT CGGACCGCGC CAGGATCCGT CCTCGCCGTA CTCCGGGGTG ATCAGCATTT TCAGCGAACG CGCGCAGAAA GGCCTGCCGA TCACCGTGTT CGGCGATGGC GAGCAGACCC GGGATTTCAT GTACGTCGAA GACCTGGTCG ATGTCCTGGT GCAGGCGCTC GAAAAGCCGC AAGTGGATGT CGGTGCGGTG AACGTCGGCT GGAATCAGGC GACCAACCTC AAGCAGATGC TGGCCGCGCT CGAAGCGGTG GTCGGCGAGT TGCCGCCCGT CAGCTACGGC CCGGCGCGCT CCGGTGACAT CCGTCATTCG CGGGCGAACA ACCGCCGGTT GCTTGAGCGA TTCAAGTGCC CCACGCCAAC GCCGATGAAC GTCGGCCTGG CCCGTCTGCT CGGCCGCTGA
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Protein sequence | MAEGPVLITG GAGFIGSHLT DALLAKGHSV RILDDLSTGK RSNLPLDNPK VELIVGDVAD AALVAQAMQG CSAVAHLAAV ASVQASVDDP VKTHQSNFIG TLNVCEAMRE AGVKRVLYAS SAAVYGNNGE GESIDEDTPK APLTPYASDK LAGEQYFDFY RRQHGLEPAI FRFFNIFGPR QDPSSPYSGV ISIFSERAQK GLPITVFGDG EQTRDFMYVE DLVDVLVQAL EKPQVDVGAV NVGWNQATNL KQMLAALEAV VGELPPVSYG PARSGDIRHS RANNRRLLER FKCPTPTPMN VGLARLLGR
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