Gene Pfl01_5029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5029 
Symbol 
ID3713763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5661479 
End bp5662177 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content62% 
IMG OID 
ProductOmpW 
Protein accessionYP_350757 
Protein GI77461250 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.411044 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGT CCTTGCTCAG CGCCTCGCTG TTTGCCCTCG CGCTCGCAGC CCCGCTCGCC 
CACGCCCACG AAGCCGGCGA CATCATCGTT CGTGCCGGTG CGATCACCGT CAACCCGAAG
GCCGACAGCT CCAGCGTCAA GGTCGATCAG GGTCCGTTGA GCGGCACCAA CCTGGGCGGC
AAGGCGACCA TGAGCAGCGA CACCCAACTG GGTCTGAACT TCGCCTACAT GCTGACCAAC
AACATCGGTA TCGAGCTGTT GGCCGCCTCG CCGTTCGAGC ATGACGTGAA GATCAAGGGC
ACCGCCCTGC CAGCCGCCAA CGGCAAACTC GGCACCCTCA AACACCTGCC GCCGACCCTG
AGCGTCGTCT ACTACCCGCT GGACGCGAAG TCGGCGTTCC AGCCGTACAT CGGCGGCGGC
ATCAACTACA CCTGGATCTA CGACGAGCAC GTCGGCAGCG AAGCCCAGTC CAACGGCTTC
AGCAACTTCA AGGCGAAAAA CTCCTGGGGC CTGGCCTGGC AGGTCGGCGC CGACTACATG
CTGACCGACA ACATCATGCT CAACGCCCAG GTGCGCTACA TCGATATCGA CACCCGCGCC
ACCGTCGAGA ACAACGCCGT GGCCCCGGGC ACCCGTGCAC GGGTGAATGT GGACGTTGAT
CCCTTCATCT ACATGGTTGG TCTAGGCTAC AAGTTCTAA
 
Protein sequence
MNKSLLSASL FALALAAPLA HAHEAGDIIV RAGAITVNPK ADSSSVKVDQ GPLSGTNLGG 
KATMSSDTQL GLNFAYMLTN NIGIELLAAS PFEHDVKIKG TALPAANGKL GTLKHLPPTL
SVVYYPLDAK SAFQPYIGGG INYTWIYDEH VGSEAQSNGF SNFKAKNSWG LAWQVGADYM
LTDNIMLNAQ VRYIDIDTRA TVENNAVAPG TRARVNVDVD PFIYMVGLGY KF