Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5029 |
Symbol | |
ID | 3713763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5661479 |
End bp | 5662177 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | OmpW |
Protein accession | YP_350757 |
Protein GI | 77461250 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.411044 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAGT CCTTGCTCAG CGCCTCGCTG TTTGCCCTCG CGCTCGCAGC CCCGCTCGCC CACGCCCACG AAGCCGGCGA CATCATCGTT CGTGCCGGTG CGATCACCGT CAACCCGAAG GCCGACAGCT CCAGCGTCAA GGTCGATCAG GGTCCGTTGA GCGGCACCAA CCTGGGCGGC AAGGCGACCA TGAGCAGCGA CACCCAACTG GGTCTGAACT TCGCCTACAT GCTGACCAAC AACATCGGTA TCGAGCTGTT GGCCGCCTCG CCGTTCGAGC ATGACGTGAA GATCAAGGGC ACCGCCCTGC CAGCCGCCAA CGGCAAACTC GGCACCCTCA AACACCTGCC GCCGACCCTG AGCGTCGTCT ACTACCCGCT GGACGCGAAG TCGGCGTTCC AGCCGTACAT CGGCGGCGGC ATCAACTACA CCTGGATCTA CGACGAGCAC GTCGGCAGCG AAGCCCAGTC CAACGGCTTC AGCAACTTCA AGGCGAAAAA CTCCTGGGGC CTGGCCTGGC AGGTCGGCGC CGACTACATG CTGACCGACA ACATCATGCT CAACGCCCAG GTGCGCTACA TCGATATCGA CACCCGCGCC ACCGTCGAGA ACAACGCCGT GGCCCCGGGC ACCCGTGCAC GGGTGAATGT GGACGTTGAT CCCTTCATCT ACATGGTTGG TCTAGGCTAC AAGTTCTAA
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Protein sequence | MNKSLLSASL FALALAAPLA HAHEAGDIIV RAGAITVNPK ADSSSVKVDQ GPLSGTNLGG KATMSSDTQL GLNFAYMLTN NIGIELLAAS PFEHDVKIKG TALPAANGKL GTLKHLPPTL SVVYYPLDAK SAFQPYIGGG INYTWIYDEH VGSEAQSNGF SNFKAKNSWG LAWQVGADYM LTDNIMLNAQ VRYIDIDTRA TVENNAVAPG TRARVNVDVD PFIYMVGLGY KF
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