Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5014 |
Symbol | |
ID | 3714680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5650084 |
End bp | 5651049 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | thiamine monophosphate kinase |
Protein accession | YP_350742 |
Protein GI | 77461235 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.424029 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGAGT TTGAGCTGAT CCGCAATTTC TTTGCCGCCG CGCCTTGTGC GCAGGGCGGC GAAGGCGTTG CACTGGGGAT CGGCGATGAC TGCGCCTTGC TGGCGGTTCC TTCCGGGGAA CAGCTGGCGG TTTCCACCGA TACGCTGGTG GCCGGCGTAC ATTTCGCCGA TCCCTGCGAT CCGTTTCTGC TCGGTCAGCG CTCGCTGGCC GTGGCGGTCA GCGACCTCGC TGCCATGGGC GCCACGCCCG TCGCCTTTAC CCTTGCCCTG ACTCTGCCGA CGGTGACTGC CGATTGGCTG CAAGCCTATG CCCGCGGTTT GAACCGCATG GCGCAGGGCT GCGGCGTGGC ACTGGTCGGC GGCGACACGA CGCGCGGGCC GTTGAGCCTG ACCGTCACCG TTTTCGGTCG CGTCCCGGCC GGCAAAGCGC TGACCCGCAG CGGCGCGCAG CCGGGCGATC TGCTGTGTGT CGGCGGCGAA CTGGGCAATG CAGCCGGGGC CTTGCCGCTG GTGCTGGGTC AGCGTGACGC CGAACCACAC ATCGCTCAGC CGCTGCTCGA TCATTACTGG TCGCCGCAAC CGCAACTCGC CCTCGGTCAG GCCCTGCGTG GCAAGGCCAC CTCGGCGTTG GACATCTCCG ATGGGCTGCT CGCCGATTGC GGTCACATCG CACTGGCCTC GAAGGTCCGC CTCGAAGTCG AGCGCGAGCG CGTTCCGTTG TCGGAGGCGC TGGTGGCGTT TCTCGGTCAG CGCGGCGCCG AACGTGCGGC GTTGAGCGGT GGCGATGATT ACGTGCTGGC CTTCACCTTG CCGTCCGTCG AGTTGCCGGC GTTGCTCGCC GATAGCTGGT CGATCCATGT GATCGGCCGC GTGACGCAAG GGCAGGGCGT GGTGCTGCTG GATCGCGACG GGCACGACAT CACCCCGCAA ATCCGGGGTT ATCAACATTT TCAGGAGTCA CCGTGA
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Protein sequence | MGEFELIRNF FAAAPCAQGG EGVALGIGDD CALLAVPSGE QLAVSTDTLV AGVHFADPCD PFLLGQRSLA VAVSDLAAMG ATPVAFTLAL TLPTVTADWL QAYARGLNRM AQGCGVALVG GDTTRGPLSL TVTVFGRVPA GKALTRSGAQ PGDLLCVGGE LGNAAGALPL VLGQRDAEPH IAQPLLDHYW SPQPQLALGQ ALRGKATSAL DISDGLLADC GHIALASKVR LEVERERVPL SEALVAFLGQ RGAERAALSG GDDYVLAFTL PSVELPALLA DSWSIHVIGR VTQGQGVVLL DRDGHDITPQ IRGYQHFQES P
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