Gene Pfl01_4997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4997 
Symbol 
ID3714663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5628581 
End bp5629321 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content60% 
IMG OID 
Producttranscriptional regulator 
Protein accessionYP_350725 
Protein GI77461218 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.357527 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAGA ACACTAGCGG TCCAAGATTC AAGGCACTCC TGGAAGCTGC GAACATCACC 
ACCACGGGAT TCGCAAAGTT CTGGGGCACG GAAGCCCAAA ACGTTCATAA CTGGTACACC
CGGGGCGTAC CCGCGTACCG CATGGAAGAA GTCGCGCGCC TGCTGTCCGT CAACAGCCAA
TGGCTGAAGA CCGGCGAAGG CCCGAAAGAC GCCCCGCACC TGCATACGGA GTCGGGCGAC
ATCCTCGATG CCCATGCCAT TCGCGGCGTC TACACGGTGC TAGAAACCAA CGACATCGAA
TTGCCGCTCT ACAAAGAAAC CCCGGTCGCC CCCGGCTCCG ACAAAACCCA TGTCATAAAA
GACCCGGAGC AAACCATCCG CCTGCCCCGC AGTCACCTCG AAACACTGGA AATCCGCTAC
ACCGACGCCA TTTGCACCCA CATGATCGGC AACAGCATGG CCGAGAAAAT CGAAGACGGC
TCCACCCTCG CCATCGACCG CGGCCTCACC CAGGTGGTTG ACGGCGAAAT CTACGCCATT
GAGCACGACG GCATGTTGCG TATCAAATAC CTGCACCGCA TGCCCGGCAA CGCCCTGCGC
CTGCGCAGCC ACAACAGCGC CGAATACCCG GACGAGATCT TCCGGGCCTC ACAGATCGAA
GAGCAGAGGA TTCATGTGTT GGGGTGGGTG TTCTGGTGGT CGACGCTGGG CAAGCGGCGG
CCGGTGGTGC CGTTTCTCTG A
 
Protein sequence
MRKNTSGPRF KALLEAANIT TTGFAKFWGT EAQNVHNWYT RGVPAYRMEE VARLLSVNSQ 
WLKTGEGPKD APHLHTESGD ILDAHAIRGV YTVLETNDIE LPLYKETPVA PGSDKTHVIK
DPEQTIRLPR SHLETLEIRY TDAICTHMIG NSMAEKIEDG STLAIDRGLT QVVDGEIYAI
EHDGMLRIKY LHRMPGNALR LRSHNSAEYP DEIFRASQIE EQRIHVLGWV FWWSTLGKRR
PVVPFL