| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4979 |
|---|
| Symbol | |
|---|
| ID | 3714937 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 5610566 |
|---|
| End bp | 5611156 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | peptidase S16, lon-like |
|---|
| Protein accession | YP_350707 |
|---|
| Protein GI | 77461200 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.043652 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCTGC CGCTTTTTCC GCTGAACACG GTGCTGTTTC CCGGCTGCAA TCTGGATTTG
CAGATCTTCG AGGCGCGCTA CCTGGACATG ATCGGCCGCT GCATGAAACA GGGCGGCGGG
TTCGGCGTGG TGTGCATCCT GGAAGGCAGC GAAGTCGGTG TCGCGCCGGA AGGTTTCGCC
ATGGTCGGCT GCGAAGCGCG CATCACCGAT TTCCAGCAGC AGGACAACGG ACTGCTGGGC
ATCCGGGTGC AGGGCGGGCG GCGCTTCATC GTGCAGCGCA CTGAAGTGCA ACGCGACCAA
TTGATCGTGG CCGAGGTCGA GTGGCTGGAC GAAGAGCCCG AACAACCGTT GCAGGATGAA
GACGCCGATC TGGTGGCGTT GCTCAAGGCC CTGGCCGAGC ACCCGATGGT CGAGGCGCTG
AACATGGGTA TCGAGGCTGC CGGGCAGCAG TCATTGGCCA ATCAGCTGGC TTATCTGCTG
CCGTTTGCCG AGGAAGACAA GATCGACCTG CTGCAACTCG ATGATCCGCA GCAGCGGCTG
GATGCGATCC AGGCGCTGCT CGATGAGTTG CAGGGCGAGC TGTTTGCCTA G
|
|---|
| Protein sequence | MSLPLFPLNT VLFPGCNLDL QIFEARYLDM IGRCMKQGGG FGVVCILEGS EVGVAPEGFA
MVGCEARITD FQQQDNGLLG IRVQGGRRFI VQRTEVQRDQ LIVAEVEWLD EEPEQPLQDE
DADLVALLKA LAEHPMVEAL NMGIEAAGQQ SLANQLAYLL PFAEEDKIDL LQLDDPQQRL
DAIQALLDEL QGELFA
|
|---|
| |