Gene Pfl01_4959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4959 
SymbolholA 
ID3715878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5587653 
End bp5588690 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content65% 
IMG OID 
ProductDNA polymerase III subunit delta 
Protein accessionYP_350687 
Protein GI77461180 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.67916 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTCG CTCCCGCCCA ACTCGGCAAA CACCTGCAAG GCGCCCTCGC GCCGGTCTAC 
ATCATCAGCG GCGATGACCC GCTGCTGTGT CAGGAAGCTG CCGACGCCAT TCGCTCCGCT
GCCCGTCAGC AAGGGTTCGA CGAACGCCAG GTCTTTGCCG CCGACGCCAA TTTCGATTGG
GGTACGCTGC TGCAGGCCGG CGCCAGCATG TCGCTGTTCG CCGAAAAGCG CTTGCTGGAA
CTGCGCCTGC CTTCGGGCAA GCCCGGTGAC AAGGGCGCCG CCGCGCTGAT CGAGTACTGC
TCGCGCCCGG CTGAAGACAC GGTACTGTTG ATCAGCCTGC CGAAGCTGGA CGGTAGCGCG
CAGAAGACCA AGTGGGGCAA GGCGCTGGTC GAGGGTCAGC AGACCCAGTT CGTGCAGATC
TGGCCGGTAG ATGCCAACCA GCTGCCGAGC TGGATTCGTC AGCGACTGTC CCAGGCCGGC
TTGTCGGCCA GCCAGGACGC GGTCGAATTG ATCGCCGCGC GGGTCGAAGG CAATCTGCTG
GCTGCCGCGC AAGAGATCGA AAAACTCAAG CTGATGGCCG AGGGCGGGCA GATCACCGTC
GAAACCGTGC AGGCAGCCGT GGCCGACAGT GCGCGCTTCG ACGTATTCGG CCTGACCGAC
GCAGTGCTCA ACGGCGAACC GGCTCACGCC CTGCGCATGC TCGAAGGGCT GCGCGGTGAA
GGGGTCGAAC CACCGGTGAT CCTCTGGGCT CTGGCCCGGG AGTTGCGCTT GCTGGCCAAC
ATCTCGTTGC AGTACAGCCA GGGCACACCG CTGGACAAGT GCTTCAGTCA GGCCAAGCCG
CCGGTCTGGG ACAAGCGCAA ACCGCTGATG AGCAAGGCCC TGCAACGTTA CTCGGCGCAA
CGCTGGGCGC AGTTGCTGCT CGAAGCCCAG CGTATCGATG CGCAGATCAA GGGCCAGGCA
GCCGGTTCGC CGTGGATGAG CCTCAGCCGG TTGGCGCTGC TGATGGCCGG TCAGCGTCTG
ACATTACCTG CCGAATGA
 
Protein sequence
MKLAPAQLGK HLQGALAPVY IISGDDPLLC QEAADAIRSA ARQQGFDERQ VFAADANFDW 
GTLLQAGASM SLFAEKRLLE LRLPSGKPGD KGAAALIEYC SRPAEDTVLL ISLPKLDGSA
QKTKWGKALV EGQQTQFVQI WPVDANQLPS WIRQRLSQAG LSASQDAVEL IAARVEGNLL
AAAQEIEKLK LMAEGGQITV ETVQAAVADS ARFDVFGLTD AVLNGEPAHA LRMLEGLRGE
GVEPPVILWA LARELRLLAN ISLQYSQGTP LDKCFSQAKP PVWDKRKPLM SKALQRYSAQ
RWAQLLLEAQ RIDAQIKGQA AGSPWMSLSR LALLMAGQRL TLPAE