Gene Pfl01_4942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4942 
Symbol 
ID3714025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5567448 
End bp5568947 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content63% 
IMG OID 
ProductAMP nucleosidase 
Protein accessionYP_350670 
Protein GI77461163 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTCT GCAAGTCAGA ACACAGGAAG CTGATCGTGA CCGAAGCGTT TATTGTCGTT 
CAAACCGCCG AACAGGCCGT GGATCGTCTC GCCGAGCTGC ATGAGCGGGC CACCACGGCG
CTGAACTCGG CGCTCAAGCG TTATCTCAAG GATCGCGTCG AGCCCGACGC CGAGCAACGT
GCCCTGTTCC GTTATCCCGA ACTGCGTCTG ACCTACCACT GCCAGGGCGA AGTCCCGCAG
ACCACCCGCG CCTACGCCAA GGTGCAGTTG CCGGGTACTT ACAGCGTGAC CGTTACCCAT
CCGAAGGCGT TTCGCAAATA CCTGCTCGAG CAGCTCACGC CGCTGATGCA CGACTTCACC
GTGACTGTCG AAGTCGGAGT CAGCGGGCAG AACATTCCGT ACCCGTACGT GGTCGAGCAG
GGCGATGAAC TGGCCGGCTC CGGTGTCACT GCCGCCGTGC TGGCGCGAGT GTTCCCGAGT
ACCGACCTGT CCGCCGCCAC CGATGGCATT GCCGACGGGC TCTACGACTG GGAAAACACC
GATCCGCTGC CGCTGGCGCT GTTTGACGCC GCGCGCGTCG ACTTCTCGCT GCGTCGTCTG
GTGCACTACA CCGGCAGCGA CTGGCGCCAT GTGCAGCCGT GGATTCTGTT GACCAACTAT
CACCGTTATG TCGACCAGTT CATCGTCCAT GGCCTGGAAC AACTGCGCCG CGACCCGCGT
TTCGTGCGCA TGGTGTTGCC GGGCAACGTG ATCATCGAAA AAGGCATGGA TCATGGCGAA
GCCTCGGCGA TTGCGGCCGG CGTGGTCTGG CACCGCTATC AGATGCCGGC CTATCACCTG
ATCGCCAGCG ATGGCCACGG CGTGACCTTG GTCAATATCG GCGTCGGCCC GTCCAACGCC
AAGAACATCA CCGACCACCT GGCTGTGCTG CGTCCGCATT GCTGGCTGAT GATCGGTCAC
TGCGGCGGCC TGCGTCAGTC ACAGACCATC GGCGACTACG TGCTGGCTCA CGCTTACATG
CGTCGCGACG GGATTCTCGA CCGGGTAGTG CCGCCGAACA TTCCGATTCC GGCCCTGGCC
GAAGTGCAAC TGGCGTTGCA GCAAGCGGCG GCCAACATCA CCGGCGAAAA AGGCGAAGAG
CTGAAGAAGC GCCTGCGCAC CGGCACCGTG CTGACCTACG ACGACCGCAA CTGGGAATTG
CGCTGGGCCC AGGAGCGACC GCTGATCAAC CTGTCCCGCG CCGTGGCCGT GGACATGGAA
AGCGGCACCA TCGCCGCCCA GGGTTATCGC CTGCGGGTGC CGTACGGCAC GTTGTTGTGT
GTGTCGGACA AGCCGCTGCA CAGCGAAATC AAGCTGCCGG GTTCGGCCAA CGCGTTCTAC
GAACGTGCGG TCAGTCAGCA TTTGAAGATC GGTATCGAAG CAGTGGATCT GCTGCGCACC
GAACTCAATT CGCTGCACTC GCGCAAACTG CGCAGCTTCG ACGAGCCGCC GTTCCGCTAA
 
Protein sequence
MKLCKSEHRK LIVTEAFIVV QTAEQAVDRL AELHERATTA LNSALKRYLK DRVEPDAEQR 
ALFRYPELRL TYHCQGEVPQ TTRAYAKVQL PGTYSVTVTH PKAFRKYLLE QLTPLMHDFT
VTVEVGVSGQ NIPYPYVVEQ GDELAGSGVT AAVLARVFPS TDLSAATDGI ADGLYDWENT
DPLPLALFDA ARVDFSLRRL VHYTGSDWRH VQPWILLTNY HRYVDQFIVH GLEQLRRDPR
FVRMVLPGNV IIEKGMDHGE ASAIAAGVVW HRYQMPAYHL IASDGHGVTL VNIGVGPSNA
KNITDHLAVL RPHCWLMIGH CGGLRQSQTI GDYVLAHAYM RRDGILDRVV PPNIPIPALA
EVQLALQQAA ANITGEKGEE LKKRLRTGTV LTYDDRNWEL RWAQERPLIN LSRAVAVDME
SGTIAAQGYR LRVPYGTLLC VSDKPLHSEI KLPGSANAFY ERAVSQHLKI GIEAVDLLRT
ELNSLHSRKL RSFDEPPFR