Gene Pfl01_4909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4909 
Symbol 
ID3714149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5532059 
End bp5532874 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content62% 
IMG OID 
Productxylose isomerase-like TIM barrel 
Protein accessionYP_350637 
Protein GI77461130 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGC GAATTCTGTC CCTGGCCAGC CTGACCGTCC TCGAATTGTC GCCACCCTAC 
ATGATCGAGG TCGCGGCTCG TGCCGGTTAC AGCCATGTCG GCCTGCGCCT GGAGCCGGCA
ACGGCCGAGG AATATCATTT TCCGCTGGTA GCCGATGGCG ATTTGCGGCG TCAGACACTG
GCGCGTTTGC GTGACACCGG AATCGGCGTG CTCGACGTGG AAATCCTTCG ATTGAAGCCG
CAGACAGTGG TCGCGGATTT GGAGCGGCTG CTCAGCGTCG GCGCGGAGTT CGGTGCCAGT
GAGTTGCTGG TCGCCGGTAA CGATCCCGAC GAGCAGCGGC TCACCGATCA TTTCGCGGCA
CTGTGCGATC TGGCCGCGCC CTACGGTTTG CATCCGCATC TGGAATTCAT GCCATGGACC
GATGCGCGCA ATCTCGAACA GGCATTGCGC GTCGTCGACA ACGCCGGGCG CGAAAACGGT
GCGGTGCTGG TGGATGCGTT TCACTTTGAC CGCTCCGGTT CGCGGCTGGA AGATCTGGCC
GGTGTGCCGG CTTCGCGGCT GCGCTACGCA CAGTTGTGCG ATGTTGCCGG GCCGAGGCCA
ACGGACATGG CCGAGATCTT GCGTCAGGCT CGCAATGAGC GCCGGTTTCC CGGCGAGGGC
GATTGTGACC TGATTGGGTT GTTGCACAGT CTTCCGGCTA ACCTTCCCCT GAGTCTGGAA
ATTCCCACGG TCAAATTGCT GGAGCAGGGC GTGAGCGGAT TGCAGCGGGC GCAAATGGCG
ATCGACCGGA CACGGGAATT GTTGGCCCGG CTTTAA
 
Protein sequence
MSERILSLAS LTVLELSPPY MIEVAARAGY SHVGLRLEPA TAEEYHFPLV ADGDLRRQTL 
ARLRDTGIGV LDVEILRLKP QTVVADLERL LSVGAEFGAS ELLVAGNDPD EQRLTDHFAA
LCDLAAPYGL HPHLEFMPWT DARNLEQALR VVDNAGRENG AVLVDAFHFD RSGSRLEDLA
GVPASRLRYA QLCDVAGPRP TDMAEILRQA RNERRFPGEG DCDLIGLLHS LPANLPLSLE
IPTVKLLEQG VSGLQRAQMA IDRTRELLAR L