Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4909 |
Symbol | |
ID | 3714149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5532059 |
End bp | 5532874 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | xylose isomerase-like TIM barrel |
Protein accession | YP_350637 |
Protein GI | 77461130 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAGC GAATTCTGTC CCTGGCCAGC CTGACCGTCC TCGAATTGTC GCCACCCTAC ATGATCGAGG TCGCGGCTCG TGCCGGTTAC AGCCATGTCG GCCTGCGCCT GGAGCCGGCA ACGGCCGAGG AATATCATTT TCCGCTGGTA GCCGATGGCG ATTTGCGGCG TCAGACACTG GCGCGTTTGC GTGACACCGG AATCGGCGTG CTCGACGTGG AAATCCTTCG ATTGAAGCCG CAGACAGTGG TCGCGGATTT GGAGCGGCTG CTCAGCGTCG GCGCGGAGTT CGGTGCCAGT GAGTTGCTGG TCGCCGGTAA CGATCCCGAC GAGCAGCGGC TCACCGATCA TTTCGCGGCA CTGTGCGATC TGGCCGCGCC CTACGGTTTG CATCCGCATC TGGAATTCAT GCCATGGACC GATGCGCGCA ATCTCGAACA GGCATTGCGC GTCGTCGACA ACGCCGGGCG CGAAAACGGT GCGGTGCTGG TGGATGCGTT TCACTTTGAC CGCTCCGGTT CGCGGCTGGA AGATCTGGCC GGTGTGCCGG CTTCGCGGCT GCGCTACGCA CAGTTGTGCG ATGTTGCCGG GCCGAGGCCA ACGGACATGG CCGAGATCTT GCGTCAGGCT CGCAATGAGC GCCGGTTTCC CGGCGAGGGC GATTGTGACC TGATTGGGTT GTTGCACAGT CTTCCGGCTA ACCTTCCCCT GAGTCTGGAA ATTCCCACGG TCAAATTGCT GGAGCAGGGC GTGAGCGGAT TGCAGCGGGC GCAAATGGCG ATCGACCGGA CACGGGAATT GTTGGCCCGG CTTTAA
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Protein sequence | MSERILSLAS LTVLELSPPY MIEVAARAGY SHVGLRLEPA TAEEYHFPLV ADGDLRRQTL ARLRDTGIGV LDVEILRLKP QTVVADLERL LSVGAEFGAS ELLVAGNDPD EQRLTDHFAA LCDLAAPYGL HPHLEFMPWT DARNLEQALR VVDNAGRENG AVLVDAFHFD RSGSRLEDLA GVPASRLRYA QLCDVAGPRP TDMAEILRQA RNERRFPGEG DCDLIGLLHS LPANLPLSLE IPTVKLLEQG VSGLQRAQMA IDRTRELLAR L
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