Gene Pfl01_4894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4894 
Symbol 
ID3714251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5518341 
End bp5519579 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content63% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_350622 
Protein GI77461115 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGCC AAGAGCCCTT GCTGTTACGT CACCACCGTC CCTTTCTTGC GTTCTGGTTT 
GCCCGGATCT TCACCGCCAG TGGTTTTCAG ATGCTCACCG TGGCGATCGG CTGGAACCTC
TATCAATTGA CCGGCAATGT GCTCGACCTG GGTCTGGTCG GGTTGGTGGA ATTCGCACCA
CGGGTCTTGT TCATGCTGCA CACCGGCCAC GTTGCCGATC GCTACGACCG ACGCAGAGTC
GCGGCGATCT GCCAGTCGTT GCAGGCCCTG ATCGCGCTGG CATTGGCCAT CGGCAGTGCA
ACCGATCATG TCACCCGGGA AATGATCTTT ATCCTGGCGT TCCTGCTCGG CGCCGCACGC
TCGTTCGAAA TGCCGACCAC TCAAGCGCTG CTGCCGAGCA TCGTACCCAG TGCGCTGTTC
CCGCGTGCCG TCGCCGCCGC GCAATCTGCA CAGCAATCGG CCACCATCGT CGCCCCGGCC
CTCGGCGGTC TGCTTTACGC CTTCGGCAGC GTGTGGGTCT ACGGGCCGAC GGTGATTCTG
TATGTCATCG CCTGCACCTT GATGCTCAAC CTGCCGGCCC GGCAAACCCC GCTGAACAAG
GGCAAGGCGA CACTGGATTC GTTGCTGGCA GGGATTCGTT TCATTCGCAG CCGCCCGGAC
ATTCTCGGGG CTATCTCGCT GGATCTGTTC GCCGTGCTAC TCGGCGGCGC CACGGCGCTG
TTGCCGGTGT TCGCCAAGGA CATCCTGCTG ACCGGGCCGT GGGGGCTGGG GTTGCTGCGC
TCGGCGCCGG CAGTTGGCGC GCTGATGATG TCGCTGTTCC TGGCGCGGTT TGCCGTCGAG
CGAAACGTCG GTCGAGTAAT GTTCACCGCC GTCGGTGTAT TCGGCGTGGC AACCATCGCC
TTCGGTCTGT CGACCTCGTT CTGGTTCTCC CTGGCGGTAC TTGTGGTGCT GGGCGCGGCG
GACATGATCA GCATGGTGAT CCGCGCCTCG TTCGTGCAAC TGGAAACCCC GGACGAAATG
CGCGGCCGGG TCAGCGCGGT GAACGGCCTG TTCATCGGTG CCTCAAACCA GTTGGGCGAA
TTCGAGTCCG GTCTCACCGC GCATTGGTTC GGCACCGTGC CGGCGGTGGT GATGGGCGGC
ATCGGCACGC TGGTGGTGAC CGGAACCTGG ATCAAACTGT TCCCGACCCT GGCCAACCGC
GACCGGATGC ATGTGCCGGT GGAAGAGGTG AAGGCCTGA
 
Protein sequence
MPSQEPLLLR HHRPFLAFWF ARIFTASGFQ MLTVAIGWNL YQLTGNVLDL GLVGLVEFAP 
RVLFMLHTGH VADRYDRRRV AAICQSLQAL IALALAIGSA TDHVTREMIF ILAFLLGAAR
SFEMPTTQAL LPSIVPSALF PRAVAAAQSA QQSATIVAPA LGGLLYAFGS VWVYGPTVIL
YVIACTLMLN LPARQTPLNK GKATLDSLLA GIRFIRSRPD ILGAISLDLF AVLLGGATAL
LPVFAKDILL TGPWGLGLLR SAPAVGALMM SLFLARFAVE RNVGRVMFTA VGVFGVATIA
FGLSTSFWFS LAVLVVLGAA DMISMVIRAS FVQLETPDEM RGRVSAVNGL FIGASNQLGE
FESGLTAHWF GTVPAVVMGG IGTLVVTGTW IKLFPTLANR DRMHVPVEEV KA