Gene Pfl01_4809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4809 
Symbol 
ID3716629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5425764 
End bp5427164 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content62% 
IMG OID 
ProductPoly(A) polymerase, PcnB 
Protein accessionYP_350537 
Protein GI77461030 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0814505 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0275687 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAGA AGCTGTTCCA GTCATTCCGA ACTCCCCTGC GTCGTACGCA ACACATCCGT 
AGCACGCCTG AAGTCCTCAA CAGCGGCCAA CATTCGCTGC AGAAGGCGCA ATTCAGCCGT
TACGCGGTCA ACATCGTCGA ACGTCTGCAG GGCGCCGGCT ACCAGGCCTA CCTGGTTGGC
GGTTGTGTGC GAGACATGCT GCTGGGCATC ACGCCCAAAG ACTTCGACGT CGCCACCAGC
GCCACCCCCG AGCAGGTTCG TGCCGAATTC CGCAACGCGC GGATCATCGG CCGCCGCTTC
AAGCTGGTAC ACATCCATTT CGGTCGCGAA ATCATCGAAG TCGCGACCTT CCGCGCCAAT
CACCCGCAAA ACGAAGACGA CGAAGACAGC AACCAGTCTT CGCGCAACGA GAGCGGGCGC
ATTCTGCGTG ACAACGTCTA CGGCACCCTG GAAGAAGACG CGCAACGCCG CGACTTCACC
ATCAACGCCC TGTATTACGA TCCGGTCAGC GAGCGCATCC TCGACTACGC CAACGGCGTG
CACGACATCC GCAATCACCT GATCCGTCTG ATCGGCGACC CGAAGCAGCG TTACCAGGAA
GACCCGGTGC GGATGCTGCG GGCCGTGCGT TTTGCCGCCA AGCTCAATTT CGGTATCGAG
AAGCACACCG TCCAGCCAAT CCGCGAACTG GCGCCGATGC TGCGCGAGAT CCCGTCGGCC
CGCCTGTTCG AGGAAGTGCT CAAGCTGTTC CTCTCCGGTC ACGGTGCCAT CACCTTCGAG
ATGCTGGTCG ACCTGCAACT GTTCGCCCCG CTGTTCCCGG CCAGTGCCGA TGCGCTGGAA
CACAACCCTG AATACACCCA CACGCTGATC AGCGAAGCAC TGACCAACAC CGATCTGCGG
ATCAAGCAGA ACAAACCGGT GACCCCGGCG TTCCTGTTCG CCGCGCTGCT GTGGCCTGCC
CTGCCGGCCC GCGTGTTGCG TCTGCAAGAG CGTGGCATGC CGCCGATTCC GGCGATGCAG
GAAGGCGCTC ACGAACTGAT CGCCGAACAG TGCCAGCGCA TTGCGATTCC AAAACGTTTC
ACCATGCCGA TCCGCGAAAT CTGGGACATG CAGGAACGCC TGCCACGCCG CAGCGGCAAA
CGCGCCGATC TGCTGCTGGA CAATCCGCGC TTCCGCGCCG GCTACGACTT CCTGCTGCTG
CGTGAAAGCG CCGGAGAGCA GACCGATGGC CTGGGCGAAT GGTGGACCGA TTATCAGGAC
GCCAACGACA GCGAACGTCG CGACATGATC CGAGACCTCA GCGGCAAGGG TGATGACGCC
AGTGGCGCAC CGCGCAAACG TCGCCGCAGC AGCGGTTCCA AGCGCAAACG TGCCGGCGCA
CCGAGCGCCA CGGGCGAATA A
 
Protein sequence
MLKKLFQSFR TPLRRTQHIR STPEVLNSGQ HSLQKAQFSR YAVNIVERLQ GAGYQAYLVG 
GCVRDMLLGI TPKDFDVATS ATPEQVRAEF RNARIIGRRF KLVHIHFGRE IIEVATFRAN
HPQNEDDEDS NQSSRNESGR ILRDNVYGTL EEDAQRRDFT INALYYDPVS ERILDYANGV
HDIRNHLIRL IGDPKQRYQE DPVRMLRAVR FAAKLNFGIE KHTVQPIREL APMLREIPSA
RLFEEVLKLF LSGHGAITFE MLVDLQLFAP LFPASADALE HNPEYTHTLI SEALTNTDLR
IKQNKPVTPA FLFAALLWPA LPARVLRLQE RGMPPIPAMQ EGAHELIAEQ CQRIAIPKRF
TMPIREIWDM QERLPRRSGK RADLLLDNPR FRAGYDFLLL RESAGEQTDG LGEWWTDYQD
ANDSERRDMI RDLSGKGDDA SGAPRKRRRS SGSKRKRAGA PSATGE