Gene Pfl01_4807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4807 
Symbol 
ID3716627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5420622 
End bp5423570 
Gene Length2949 bp 
Protein Length982 aa 
Translation table11 
GC content63% 
IMG OID 
Producttwo-component sensor kinase CbrA 
Protein accessionYP_350535 
Protein GI77461028 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0111257 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTTA GCCTGACCCA GATGCTGCTG ATCAGCGCCG CCTACCTGGC CGCGTTGTTC 
GGCGTGGCCT GGATCAGTGA ACGGGGCATG ATCCCGCGGG CGATCATTCG CCATCCGTTG
ACCTACACCC TGTCGCTGGG GGTCTACGCC AGTGCATGGG CGTTCTACGG TACGGTGGGT
CTGGCCTATC AGTACGGCTA CGGTTTTCTG TCCAGTTATC TCGGGGTATC CGGCGCGTTT
CTGCTGGCGC CGGTGCTGCT GTATCCGATC CTCAAGATCA CCCGCACTTA TCAACTGTCG
TCGCTGGCAG ACCTGTTCGC CTTTCGCTTT CGCAGCACCT GGGCCGGTGC GCTGACCACG
ATTTTCATGC TGATCGGCGT ACTGCCGTTG CTGGCGTTGC AGATCCAGGC CGTGGCCGAC
TCCATCGGCA TCCTCACCGG CGAACCGGTG CAGAATCGCG TGGCCCTGGC GTTCTGTGCG
CTGATCATCC TGTTCACGAT CTTCTTCGGC TCGCGCCACA TCGCCACCCG TGAAAAGCAC
GAAGGGCTGG TATTCGCGAT TGCCTTCGAA TCGGTGATCA AACTGGCGGC CCTCGGCGGC
GTTGGCCTCT ACGCGCTGTA CGGCGTATTC GACGGCCCGC AACAGCTTGA ACTGTGGCTG
CTGCAGAATC AGACCGCCCT CGCCGCTCTG CACACACCGT TGCAGGAAGG CCCGTGGCGC
ACGTTGCTGC TGGTGTTTTT CGCCTCGGCG ATCGTGATGC CGCACATGTA TCACATGACC
TTCACCGAAA ACCTCAACCC GCGCTCGCTG GTCAGCGCGA GCTGGGGCCT GCCGCTGTTC
CTGCTGTTGA TGAGCCTGGC CGTGCCGCTG ATTCTCTGGG CCGGCCTGAA ACTCGGCGCC
ACCACCAATC CGGAATACTT CACCCTCGGC ATCGGTATCG CCGCCAACAG CAAGTCGCTG
GCGTTGCTGG CCTATGTCGG CGGATTGTCG GCGGCCAGCG GCCTGATCAT CGTCACCACG
CTGGCGCTGT CGGGCATGGC CCTGAACCAC CTAGTGCTGC CGCTCTACCA GCCACCGGCC
GAGGGCAATA TCTATCGCTG GCTGAAATGG ACCCGCCGGG CGCTGATCGT CGCGATCATC
ATGGCCGGTT TCTGCTTCTA CCTGATGCTC GGCGCCGAGC AGGACCTGGC CAACCTCGGC
ATCGTCGCCT TCGTCGCGAC CCTGCAATTT CTGCCGGGCG TGCTGTCGGT GCTGTACTGG
CCGACCGCCA ATCGCCGCGG CTTTATCGCT GGTCTGCTGG CGGGGATCGT GGTGTGGGTC
GTGACCATGC TGTTGCCGCT GGTCGGCAAT CTGCAGGGTT TCTATATTCC GTTACTGAAC
ATGATCTACG TACTGGACGA CACCAGCTGG CACATGGCGG CCATCGCCTC GCTGGCGGCC
AACGTCCTGA TGTTCACCCT GATTTCGTTG TTCACCAATG CCAGCCCCGA AGAGGCCAGC
GCCGCCGAAG CTTGCGCTGT GGATAACGTA CGCCGTCCGC AGCGCCGCGA ATTGCACGCC
GCTTCTCCGC AGGAGTTCGC CACGCAACTG GCCAAGCCAC TGGGTGCCAA GGCTGCGCAG
AAAGAAGTCG AACAGGCCCT GCGCGACCTT TATCTGCCGT TCGACGAGCG CCGCCCCTAT
GCATTGCGCC GCCTGCGTGA CCGGATCGAA GCCAACCTCT CCGGCCTGAT GGGCCCGAGC
GTCGCCCAGG ACATGGTGGA AACCTTCCTG CCGTACAAGG CCGGCGGCGA AAACTACGTC
ACCGAAGACA TCCATTTCAT CGAAAGCCGC CTCGAGGATT ACCACTCGCG CCTGACCGGT
CTGGCGGCCG AGCTCGACGC CTTGCGCCGC TACCACCGCC AGACCCTGCA GGAACTGCCG
ATGGGCGTCT GCTCGCTGGC CAAGGATCAG GAGATCCTGA TGTGGAACAA GGCCATGGAA
GAACTGACCG GGATTGCCGC GCAACGGGTG GTCGGCTCGC GCCTGAGCAC CATCGCCAAT
CCGTGGAAAG ATCTGCTGCA AGGCTTCATC CACCTGCCCG ACGAGCACTT GCACAAGCAG
CACCTGGCCC TCGACGGCCA GACCCGCTGG CTGAACCTGC ACAAGGCGGC CATCGACGAG
CCGCTGGCAC CGGGCAATAG CGGCCTGGTG CTGCTGGTGG AAGACCTGAC CGAAACCCAG
ATGCTCGAAG ACAAACTGGT GCATTCCGAG CGCCTGGCCA GCATCGGTCG CCTCGCGGCG
GGTGTTGCCC ACGAAATCGG CAACCCGATC ACCGGTATCG CCTGTCTCGC GCAAAACCTG
CGCGAAGAGC GCGAAGACGA CGGTGAGCTG ACGGAAATCA GCGGCCAGAT CCTCGAACAG
ACCAAACGCG TGTCACGCAT CGTCCAGTCG TTGATGAGTT TCGCCCACGC CGGCAGCCAT
CAGCACAGCG ACGAGCCCGT CTGTCTGGCG GAAGTCGCCC AGGACGCCAT CGGCCTGCTG
GCCCTCAACC GGCGCAATTT CGAAGTGCAG TTCTACAACC TGTGCGATCC CGATCACTGG
GTCGAAGGCG ATCCGCAGCG GCTCGCCCAG GTGCTCATCA ATCTGCTCTC CAACGCCCGT
GACGCCTCGC CTGCCGGCAG TGCGGTGCGG GTCAAGAGCG AAGCCGGCGA ACACACGGTC
GATCTGATCG TCGAAGACGA AGGCAGCGGA ATTCCGTCGA GCATCATGGA TCGATTGTTC
GAACCCTTCT TCACCACCAA GGATCCTGGC GAAGGCACCG GTCTGGGCCT TGCACTGGTC
TATTCCATCG TTGAAGAGCA TTATGGACAA ATCACCATCG ACAGCCCGGC TGATGTTCAG
AGCCAGCGCG GCACCCGTAT CCGGGTGACA TTGCCGCGCC ATGTCGAAGC GACGTCCGCT
GTGAACTGA
 
Protein sequence
MSFSLTQMLL ISAAYLAALF GVAWISERGM IPRAIIRHPL TYTLSLGVYA SAWAFYGTVG 
LAYQYGYGFL SSYLGVSGAF LLAPVLLYPI LKITRTYQLS SLADLFAFRF RSTWAGALTT
IFMLIGVLPL LALQIQAVAD SIGILTGEPV QNRVALAFCA LIILFTIFFG SRHIATREKH
EGLVFAIAFE SVIKLAALGG VGLYALYGVF DGPQQLELWL LQNQTALAAL HTPLQEGPWR
TLLLVFFASA IVMPHMYHMT FTENLNPRSL VSASWGLPLF LLLMSLAVPL ILWAGLKLGA
TTNPEYFTLG IGIAANSKSL ALLAYVGGLS AASGLIIVTT LALSGMALNH LVLPLYQPPA
EGNIYRWLKW TRRALIVAII MAGFCFYLML GAEQDLANLG IVAFVATLQF LPGVLSVLYW
PTANRRGFIA GLLAGIVVWV VTMLLPLVGN LQGFYIPLLN MIYVLDDTSW HMAAIASLAA
NVLMFTLISL FTNASPEEAS AAEACAVDNV RRPQRRELHA ASPQEFATQL AKPLGAKAAQ
KEVEQALRDL YLPFDERRPY ALRRLRDRIE ANLSGLMGPS VAQDMVETFL PYKAGGENYV
TEDIHFIESR LEDYHSRLTG LAAELDALRR YHRQTLQELP MGVCSLAKDQ EILMWNKAME
ELTGIAAQRV VGSRLSTIAN PWKDLLQGFI HLPDEHLHKQ HLALDGQTRW LNLHKAAIDE
PLAPGNSGLV LLVEDLTETQ MLEDKLVHSE RLASIGRLAA GVAHEIGNPI TGIACLAQNL
REEREDDGEL TEISGQILEQ TKRVSRIVQS LMSFAHAGSH QHSDEPVCLA EVAQDAIGLL
ALNRRNFEVQ FYNLCDPDHW VEGDPQRLAQ VLINLLSNAR DASPAGSAVR VKSEAGEHTV
DLIVEDEGSG IPSSIMDRLF EPFFTTKDPG EGTGLGLALV YSIVEEHYGQ ITIDSPADVQ
SQRGTRIRVT LPRHVEATSA VN