Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4807 |
Symbol | |
ID | 3716627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5420622 |
End bp | 5423570 |
Gene Length | 2949 bp |
Protein Length | 982 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | two-component sensor kinase CbrA |
Protein accession | YP_350535 |
Protein GI | 77461028 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0111257 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTTA GCCTGACCCA GATGCTGCTG ATCAGCGCCG CCTACCTGGC CGCGTTGTTC GGCGTGGCCT GGATCAGTGA ACGGGGCATG ATCCCGCGGG CGATCATTCG CCATCCGTTG ACCTACACCC TGTCGCTGGG GGTCTACGCC AGTGCATGGG CGTTCTACGG TACGGTGGGT CTGGCCTATC AGTACGGCTA CGGTTTTCTG TCCAGTTATC TCGGGGTATC CGGCGCGTTT CTGCTGGCGC CGGTGCTGCT GTATCCGATC CTCAAGATCA CCCGCACTTA TCAACTGTCG TCGCTGGCAG ACCTGTTCGC CTTTCGCTTT CGCAGCACCT GGGCCGGTGC GCTGACCACG ATTTTCATGC TGATCGGCGT ACTGCCGTTG CTGGCGTTGC AGATCCAGGC CGTGGCCGAC TCCATCGGCA TCCTCACCGG CGAACCGGTG CAGAATCGCG TGGCCCTGGC GTTCTGTGCG CTGATCATCC TGTTCACGAT CTTCTTCGGC TCGCGCCACA TCGCCACCCG TGAAAAGCAC GAAGGGCTGG TATTCGCGAT TGCCTTCGAA TCGGTGATCA AACTGGCGGC CCTCGGCGGC GTTGGCCTCT ACGCGCTGTA CGGCGTATTC GACGGCCCGC AACAGCTTGA ACTGTGGCTG CTGCAGAATC AGACCGCCCT CGCCGCTCTG CACACACCGT TGCAGGAAGG CCCGTGGCGC ACGTTGCTGC TGGTGTTTTT CGCCTCGGCG ATCGTGATGC CGCACATGTA TCACATGACC TTCACCGAAA ACCTCAACCC GCGCTCGCTG GTCAGCGCGA GCTGGGGCCT GCCGCTGTTC CTGCTGTTGA TGAGCCTGGC CGTGCCGCTG ATTCTCTGGG CCGGCCTGAA ACTCGGCGCC ACCACCAATC CGGAATACTT CACCCTCGGC ATCGGTATCG CCGCCAACAG CAAGTCGCTG GCGTTGCTGG CCTATGTCGG CGGATTGTCG GCGGCCAGCG GCCTGATCAT CGTCACCACG CTGGCGCTGT CGGGCATGGC CCTGAACCAC CTAGTGCTGC CGCTCTACCA GCCACCGGCC GAGGGCAATA TCTATCGCTG GCTGAAATGG ACCCGCCGGG CGCTGATCGT CGCGATCATC ATGGCCGGTT TCTGCTTCTA CCTGATGCTC GGCGCCGAGC AGGACCTGGC CAACCTCGGC ATCGTCGCCT TCGTCGCGAC CCTGCAATTT CTGCCGGGCG TGCTGTCGGT GCTGTACTGG CCGACCGCCA ATCGCCGCGG CTTTATCGCT GGTCTGCTGG CGGGGATCGT GGTGTGGGTC GTGACCATGC TGTTGCCGCT GGTCGGCAAT CTGCAGGGTT TCTATATTCC GTTACTGAAC ATGATCTACG TACTGGACGA CACCAGCTGG CACATGGCGG CCATCGCCTC GCTGGCGGCC AACGTCCTGA TGTTCACCCT GATTTCGTTG TTCACCAATG CCAGCCCCGA AGAGGCCAGC GCCGCCGAAG CTTGCGCTGT GGATAACGTA CGCCGTCCGC AGCGCCGCGA ATTGCACGCC GCTTCTCCGC AGGAGTTCGC CACGCAACTG GCCAAGCCAC TGGGTGCCAA GGCTGCGCAG AAAGAAGTCG AACAGGCCCT GCGCGACCTT TATCTGCCGT TCGACGAGCG CCGCCCCTAT GCATTGCGCC GCCTGCGTGA CCGGATCGAA GCCAACCTCT CCGGCCTGAT GGGCCCGAGC GTCGCCCAGG ACATGGTGGA AACCTTCCTG CCGTACAAGG CCGGCGGCGA AAACTACGTC ACCGAAGACA TCCATTTCAT CGAAAGCCGC CTCGAGGATT ACCACTCGCG CCTGACCGGT CTGGCGGCCG AGCTCGACGC CTTGCGCCGC TACCACCGCC AGACCCTGCA GGAACTGCCG ATGGGCGTCT GCTCGCTGGC CAAGGATCAG GAGATCCTGA TGTGGAACAA GGCCATGGAA GAACTGACCG GGATTGCCGC GCAACGGGTG GTCGGCTCGC GCCTGAGCAC CATCGCCAAT CCGTGGAAAG ATCTGCTGCA AGGCTTCATC CACCTGCCCG ACGAGCACTT GCACAAGCAG CACCTGGCCC TCGACGGCCA GACCCGCTGG CTGAACCTGC ACAAGGCGGC CATCGACGAG CCGCTGGCAC CGGGCAATAG CGGCCTGGTG CTGCTGGTGG AAGACCTGAC CGAAACCCAG ATGCTCGAAG ACAAACTGGT GCATTCCGAG CGCCTGGCCA GCATCGGTCG CCTCGCGGCG GGTGTTGCCC ACGAAATCGG CAACCCGATC ACCGGTATCG CCTGTCTCGC GCAAAACCTG CGCGAAGAGC GCGAAGACGA CGGTGAGCTG ACGGAAATCA GCGGCCAGAT CCTCGAACAG ACCAAACGCG TGTCACGCAT CGTCCAGTCG TTGATGAGTT TCGCCCACGC CGGCAGCCAT CAGCACAGCG ACGAGCCCGT CTGTCTGGCG GAAGTCGCCC AGGACGCCAT CGGCCTGCTG GCCCTCAACC GGCGCAATTT CGAAGTGCAG TTCTACAACC TGTGCGATCC CGATCACTGG GTCGAAGGCG ATCCGCAGCG GCTCGCCCAG GTGCTCATCA ATCTGCTCTC CAACGCCCGT GACGCCTCGC CTGCCGGCAG TGCGGTGCGG GTCAAGAGCG AAGCCGGCGA ACACACGGTC GATCTGATCG TCGAAGACGA AGGCAGCGGA ATTCCGTCGA GCATCATGGA TCGATTGTTC GAACCCTTCT TCACCACCAA GGATCCTGGC GAAGGCACCG GTCTGGGCCT TGCACTGGTC TATTCCATCG TTGAAGAGCA TTATGGACAA ATCACCATCG ACAGCCCGGC TGATGTTCAG AGCCAGCGCG GCACCCGTAT CCGGGTGACA TTGCCGCGCC ATGTCGAAGC GACGTCCGCT GTGAACTGA
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Protein sequence | MSFSLTQMLL ISAAYLAALF GVAWISERGM IPRAIIRHPL TYTLSLGVYA SAWAFYGTVG LAYQYGYGFL SSYLGVSGAF LLAPVLLYPI LKITRTYQLS SLADLFAFRF RSTWAGALTT IFMLIGVLPL LALQIQAVAD SIGILTGEPV QNRVALAFCA LIILFTIFFG SRHIATREKH EGLVFAIAFE SVIKLAALGG VGLYALYGVF DGPQQLELWL LQNQTALAAL HTPLQEGPWR TLLLVFFASA IVMPHMYHMT FTENLNPRSL VSASWGLPLF LLLMSLAVPL ILWAGLKLGA TTNPEYFTLG IGIAANSKSL ALLAYVGGLS AASGLIIVTT LALSGMALNH LVLPLYQPPA EGNIYRWLKW TRRALIVAII MAGFCFYLML GAEQDLANLG IVAFVATLQF LPGVLSVLYW PTANRRGFIA GLLAGIVVWV VTMLLPLVGN LQGFYIPLLN MIYVLDDTSW HMAAIASLAA NVLMFTLISL FTNASPEEAS AAEACAVDNV RRPQRRELHA ASPQEFATQL AKPLGAKAAQ KEVEQALRDL YLPFDERRPY ALRRLRDRIE ANLSGLMGPS VAQDMVETFL PYKAGGENYV TEDIHFIESR LEDYHSRLTG LAAELDALRR YHRQTLQELP MGVCSLAKDQ EILMWNKAME ELTGIAAQRV VGSRLSTIAN PWKDLLQGFI HLPDEHLHKQ HLALDGQTRW LNLHKAAIDE PLAPGNSGLV LLVEDLTETQ MLEDKLVHSE RLASIGRLAA GVAHEIGNPI TGIACLAQNL REEREDDGEL TEISGQILEQ TKRVSRIVQS LMSFAHAGSH QHSDEPVCLA EVAQDAIGLL ALNRRNFEVQ FYNLCDPDHW VEGDPQRLAQ VLINLLSNAR DASPAGSAVR VKSEAGEHTV DLIVEDEGSG IPSSIMDRLF EPFFTTKDPG EGTGLGLALV YSIVEEHYGQ ITIDSPADVQ SQRGTRIRVT LPRHVEATSA VN
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