Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4804 |
Symbol | |
ID | 3716624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5418955 |
End bp | 5419398 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | TraR/DksA family transcriptional regulator |
Protein accession | YP_350532 |
Protein GI | 77461025 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.178238 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00624661 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCCACCC AAGCAAAGCA ACAGGCAAGT CAGACACTCA GCGGTTTCGA ACCCTACGTC CCGAAAGCGG GCGAAGAGTA CATGGGCGCT CCAATGCGCG CGCACTTCAC CAAGATCCTG ACCAAGTGGA AACTGGACTT GATGCAGGAA GTCGACCGCA CTGTTGATCA CATGAAAGAC GAAGCGGCCA ACTTTCCTGA TCCGGCCGAC CGTGCCAGCC AGGAAGAAGA GTTCGCCCTA GAGCTGCGCG CCCGCGACCG CGAGCGCAAA CTGATCAAGA AGATCGACAA GACACTGCAA CTGATCGAAG ACGAAGAGTA CGGCTGGTGC GACTCTTGCG GCATCGAGAT CGGCGTCAAG CGCCTCGAGG CCCGTCCGAC TGCCGACATG TGCGTCGACT GCAAGAACCT GGCGGAAATC AAGGAAAAGC AGGTCGGTAA ATAA
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Protein sequence | MPTQAKQQAS QTLSGFEPYV PKAGEEYMGA PMRAHFTKIL TKWKLDLMQE VDRTVDHMKD EAANFPDPAD RASQEEEFAL ELRARDRERK LIKKIDKTLQ LIEDEEYGWC DSCGIEIGVK RLEARPTADM CVDCKNLAEI KEKQVGK
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