Gene Pfl01_4791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4791 
Symbol 
ID3716611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5405987 
End bp5406733 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content66% 
IMG OID 
Productputative lipoprotein 
Protein accessionYP_350519 
Protein GI77461012 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0132705 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00029593 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAACAAGT GGTTGATTCC AGCGGTGACC GCCGTGGCTT TGCTCAGCGG CTGCTCCACC 
GTACAGCGTG GTTCGATCCC GGTTGTGGAC TCCGGCACCG CCGTGTCCAA CAGCGAGCGG
ATTTCGGCCA ATGGCGGTTT CCGTCAAACG ACGGTGAAAC GTCCTGCACA GGCCCAGGCT
CAGGCGATCC CGCAAGGCGA TACCGGTGTG GTAGTGATGG TGCCGGGCGG CGCAGCGGCT
TCGGCGCCGA TCAGCACTTC GCCAATCGTT CCGGGCCCGG CGTCCGGTGG CATCACGCCG
GGGCCGTATA ACCCTTCGCC GGTCGAGTCG GCGCCGATCA GCTCCGGCAG TTACAGCATG
CCTTCGACGC CGAGCGGCAT TCCTTCGGCC AGCAGTGGTG GCGGTCTGTC TGCCGATGAG
CAGCTGGACG GCCCGGTTCT CGCACTGTTG ACCACTGCGC AACAGCAGCA GGCCGGTGGC
GACCTCAATG GTGCGTCCTC CAGCCTGGAA CGCGCCCAGC GTGTAGCGCC GCGCGAGCCG
CAAGTGCTTT ACCGTCTGGC GCAGGTGCGC ATGGCCCAGG GCGATGCGCC GCAAGCCGAG
CAGACCGCTC GTCGCGCACT GACCATGGCC AATGGTCGTC CGGACTTGCA GGCCAGTCTG
TGGGAATTGA TCGCTCAGGC ACGTGAGAAG CAAGGTGATT CCGCCGGCGC CACTCTGGCC
CGTCAGAAGG CCAAGGTTTC GCTGTGA
 
Protein sequence
MNKWLIPAVT AVALLSGCST VQRGSIPVVD SGTAVSNSER ISANGGFRQT TVKRPAQAQA 
QAIPQGDTGV VVMVPGGAAA SAPISTSPIV PGPASGGITP GPYNPSPVES APISSGSYSM
PSTPSGIPSA SSGGGLSADE QLDGPVLALL TTAQQQQAGG DLNGASSSLE RAQRVAPREP
QVLYRLAQVR MAQGDAPQAE QTARRALTMA NGRPDLQASL WELIAQAREK QGDSAGATLA
RQKAKVSL