Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4791 |
Symbol | |
ID | 3716611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5405987 |
End bp | 5406733 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | putative lipoprotein |
Protein accession | YP_350519 |
Protein GI | 77461012 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0132705 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00029593 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGAACAAGT GGTTGATTCC AGCGGTGACC GCCGTGGCTT TGCTCAGCGG CTGCTCCACC GTACAGCGTG GTTCGATCCC GGTTGTGGAC TCCGGCACCG CCGTGTCCAA CAGCGAGCGG ATTTCGGCCA ATGGCGGTTT CCGTCAAACG ACGGTGAAAC GTCCTGCACA GGCCCAGGCT CAGGCGATCC CGCAAGGCGA TACCGGTGTG GTAGTGATGG TGCCGGGCGG CGCAGCGGCT TCGGCGCCGA TCAGCACTTC GCCAATCGTT CCGGGCCCGG CGTCCGGTGG CATCACGCCG GGGCCGTATA ACCCTTCGCC GGTCGAGTCG GCGCCGATCA GCTCCGGCAG TTACAGCATG CCTTCGACGC CGAGCGGCAT TCCTTCGGCC AGCAGTGGTG GCGGTCTGTC TGCCGATGAG CAGCTGGACG GCCCGGTTCT CGCACTGTTG ACCACTGCGC AACAGCAGCA GGCCGGTGGC GACCTCAATG GTGCGTCCTC CAGCCTGGAA CGCGCCCAGC GTGTAGCGCC GCGCGAGCCG CAAGTGCTTT ACCGTCTGGC GCAGGTGCGC ATGGCCCAGG GCGATGCGCC GCAAGCCGAG CAGACCGCTC GTCGCGCACT GACCATGGCC AATGGTCGTC CGGACTTGCA GGCCAGTCTG TGGGAATTGA TCGCTCAGGC ACGTGAGAAG CAAGGTGATT CCGCCGGCGC CACTCTGGCC CGTCAGAAGG CCAAGGTTTC GCTGTGA
|
Protein sequence | MNKWLIPAVT AVALLSGCST VQRGSIPVVD SGTAVSNSER ISANGGFRQT TVKRPAQAQA QAIPQGDTGV VVMVPGGAAA SAPISTSPIV PGPASGGITP GPYNPSPVES APISSGSYSM PSTPSGIPSA SSGGGLSADE QLDGPVLALL TTAQQQQAGG DLNGASSSLE RAQRVAPREP QVLYRLAQVR MAQGDAPQAE QTARRALTMA NGRPDLQASL WELIAQAREK QGDSAGATLA RQKAKVSL
|
| |