Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4761 |
Symbol | |
ID | 3715374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5366483 |
End bp | 5367733 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | S-type Pyocin |
Protein accession | YP_350489 |
Protein GI | 77460982 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0685968 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCTGA ACAAATTCCT TTTCGACGAT GAGTGGCGTC GAAAACGCCC GAGCGAAAAC GCGACATGGA CCGGATGGAT TCCACCCCCG CCACCAGAAC CCGTTTATAT CCGGACAGAC GAATGGCCCA CCCCGACGCC CCGCGACGAT CTGGTATTTG CCAAGTCCTG CACACCGGAC AACTGGTGTC GAACGGATGC CGGCACAACA CCTGAGCCCG CCTCTCACTT TGGCAAAGTC ATGGTGGCAG GCGCCCTGCG CATTCCCGCT GCCAGTCACG CCGTAGCGAA GGCCATCGGC GCCGATCTGG CGTTGGGGCG CATGGCCGGT GGTGGAATCC TGCAGCAGCG CCTTAATTGG GCAATCCGCG GTGCGGGAGG CCCGGCCAGC GTGTTTATCC TCGGGATGCT CCCGACCCGA ATGGGCGACG GCACGCTTCA CACTGATGAA CAGCTACGCA GCATGAGCCG CGCCACCACT CGCGTGCGCT TCCAGTTCCG GCGTGATGCC GAAGGGGTCA TGCAGGTTTA CGGCATTCAC ACCGGCGCTT CGGGCGATGA CTCGGTGCGT ACCGTAAAAG TCGAGTGGAA CAGCGACAAG AGCGCCATGG AGGCCAAACT CAACGGCATC ACCATTCTGT GGACGCCGCA ACGCGGGCCG CTGGGATTGA TGCCACCGCT GGTTTATCCG GAGCACGGCG AACCACTGAG CACGATCCTC GTCCACCCGA TCGCCGCGAA CACCGACAGC CAGATTGAAA TCCTGCCCGG CGAAGACATT ACTGCCGAAG ATTGTATTCT GGTGTTTCCG GCAGAGACCG GGCTGAAGTC GTTGTATGTG GTGTTTTCGA AACCGGCGAG ATTGACGCCT GGGACGGTGA CGGGGATTGG TGAGGATGTT TCCGGGATAT GGCTGGCGGG AGCAGGAACG GGGATTGGTG TGCCGATTCC CACGCGAATA GCAAACAGGC TCAGAGGGCG GGAGTTTTCA AGTTTCGACA AATTCAGGGA GGCGTTTTGG GAGGAAGTGG CCAATGATCC TGATCTGGCG GAACAATTCA TACAGGGGAA CATCGAGCGA ATGCGCAATG GTTTGTCGCC AAAGGCTCGC AGGCAAGACT GGGCGGGAGA CAGAACATCT TATGAGTTGC ATCACGTCGA GCATATTGCC AATAACGGCG CGGTATACGA CATAGACAAC TTGCGAGTGA ACACTCCAAA AAATCACGTT GAAAACCACC GAAGTGGATA G
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Protein sequence | MDLNKFLFDD EWRRKRPSEN ATWTGWIPPP PPEPVYIRTD EWPTPTPRDD LVFAKSCTPD NWCRTDAGTT PEPASHFGKV MVAGALRIPA ASHAVAKAIG ADLALGRMAG GGILQQRLNW AIRGAGGPAS VFILGMLPTR MGDGTLHTDE QLRSMSRATT RVRFQFRRDA EGVMQVYGIH TGASGDDSVR TVKVEWNSDK SAMEAKLNGI TILWTPQRGP LGLMPPLVYP EHGEPLSTIL VHPIAANTDS QIEILPGEDI TAEDCILVFP AETGLKSLYV VFSKPARLTP GTVTGIGEDV SGIWLAGAGT GIGVPIPTRI ANRLRGREFS SFDKFREAFW EEVANDPDLA EQFIQGNIER MRNGLSPKAR RQDWAGDRTS YELHHVEHIA NNGAVYDIDN LRVNTPKNHV ENHRSG
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