Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4687 |
Symbol | |
ID | 3714603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5290896 |
End bp | 5291474 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | transport-associated protein |
Protein accession | YP_350415 |
Protein GI | 77460908 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.314355 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0505791 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCTA ATCGCCTTGG CCTTCTGGCC TTGACCCTGT GCCTCGGCAT CAGTGGCTGC ACCTCGGTGG TGAATGCCAG CCGTGAAGCG CCGATCGAAG ACGACCGCGG CACCCGCACT TTCGGCAGCA AGATCGATGA CTCGCTGATC GAAACCAAAG TCGGCGTCAA CGTAGCCAAG GCCGATCCGG CCCTGGACAA CGACTCGCAC ATCGTCGTGA CCAGCTTCAA CGGTGTCGTG CTGCTGGCCG GCCAGACCCC GCGCGCAGAT CTCAAGGAAA AGGCCGAACA GGCCGCCGCC AACGTTCAGC GCGTGAAAAA GGTCCATAAC GAACTGCAAG TGTTGCAGCC CTCCTCCCTG CTGGCTCGCC AGAACGATGC GTGGCTGACC ACCAAGATCA AGACCCAGAT GCTCACTGAC GCCAGCATTC CCGGCTCGCG CATCAAGGTC GTGACCGAGA ACGGTATTGT CTATCTGCTG GGCTTGCTGA CCAAACAGGA AGCCGCCCAG GCGACCAACC TGGTGCAGGG TGTTTCCGGC GTACAGAAGA TTGTGAAGCT GTTCGAATAC ATCGACTGA
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Protein sequence | MTPNRLGLLA LTLCLGISGC TSVVNASREA PIEDDRGTRT FGSKIDDSLI ETKVGVNVAK ADPALDNDSH IVVTSFNGVV LLAGQTPRAD LKEKAEQAAA NVQRVKKVHN ELQVLQPSSL LARQNDAWLT TKIKTQMLTD ASIPGSRIKV VTENGIVYLL GLLTKQEAAQ ATNLVQGVSG VQKIVKLFEY ID
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