| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4675 |
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| Symbol | murD |
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| ID | 3714575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 5277432 |
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| End bp | 5278778 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_350403 |
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| Protein GI | 77460896 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0101407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.46762 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTCTGA TCGCTTCTGA CCACTTCCGC ATCGTTGTCG GCCTCGGCAA GAGCGGCATG
TCCCTGGTTC GCTTCCTGGC GAACCGGGGC GTGGCGTTTG CCGTGGCCGA TACGCGGGAA
AATCCACCGG AACTGGCCAC GCTCCAGCGT GACTATCCGC ACGTGGAAGT GCGTTGTGGC
GAGCTGGACG TCGAGTTCCT GTGCCGTGCC GACGAGCTCT ACGTGAGCCC CGGCTTGGCG
CTGGCGACCC CGGCCCTGCA AGCCGCCGCG GCCCGTGGCG TGAAGCTGTC CGGCGACATC
GAGCTGTTCG CGCGTAACGC GAAGGCGCCG ATCGTGGCCA TCAGCGGTTC CAACGCGAAA
AGCACCGTCA CCACCTTGGT CGGCGAGATG GCGGCTGCGG CCGGCAAGCG CGTGGCCGTG
GGCGGCAACC TCGGTACGCC GGCGCTGGAT CTGCTCAGCG ATGACGTCGA GCTGTACGTG
ATGGAACTGT CGAGTTTCCA GCTGGAAACC ACCGACCAGC TCAACGCCGA AGTGGCGACC
GTGCTCAACA TCAGCGAAGA CCACATGGAC CGCTACAGCG GTCTGCCGGC GTATCACCTG
GCCAAACACC GGATCTTCCG TGGCGCCAAG CAGTTCGTGG TCAACCGTCA GGATGCGTTG
ACCCGTCCGT TGATGGGCGA GGGCCAGCCG TGCTGGACCT TCGGCCTGAG CAAACCGGAT
TTCAAGGCGT TCGGCCTGCG TGAAGAGAAT GGCGAGAAAT ACCTGGCCTT CGAATTCCAG
AACCTGATGC CGGTGCGCGA ACTGAAGATT CGCGGCGCCC ACAACCAGTC CAACGCCCTG
GCGGCGCTGG CACTCGGCCA CGCGGTCGGG CTGCCGTTCG ACGCCATGCT GGTGGCGCTG
CGCACCTTCG CCGGTCTCGA ACACCGTTGT CAGTGGGTGC GTGATCTGGA CGGCGTCGGT
TACTACAACG ATTCCAAAGC CACCAACGTG GGCGCCGCAC TGGCCGCCAT CGAAGGCCTG
GGTGCCGACA TCGACGGCAA GGTCGTGCTG ATCGCCGGTG GCGACGGCAA GGGCGCCGAA
TTCAAGGACC TGCGCGATCC GGTGGCGACC CATTGCCGCG CCGTGATCCT GATGGGCCGT
GACTCCGACA AGATCGGCGA AGCGATCGGC GATGCCGTTC CGCTGATTCG CGCCACCACG
CTGGTCGATG CGGTCGCCCA GTGCCGCGCC GCCGCCCAGC CGGGAGACGT GGTGCTGCTG
TCGCCGGCCT GCGCCAGTTT CGACATGTTC AATAACTACG AAGACCGTGG TCACCAGTTC
GTCCGCGCCG TGGAGGATCT GGCATGA
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| Protein sequence | MSLIASDHFR IVVGLGKSGM SLVRFLANRG VAFAVADTRE NPPELATLQR DYPHVEVRCG
ELDVEFLCRA DELYVSPGLA LATPALQAAA ARGVKLSGDI ELFARNAKAP IVAISGSNAK
STVTTLVGEM AAAAGKRVAV GGNLGTPALD LLSDDVELYV MELSSFQLET TDQLNAEVAT
VLNISEDHMD RYSGLPAYHL AKHRIFRGAK QFVVNRQDAL TRPLMGEGQP CWTFGLSKPD
FKAFGLREEN GEKYLAFEFQ NLMPVRELKI RGAHNQSNAL AALALGHAVG LPFDAMLVAL
RTFAGLEHRC QWVRDLDGVG YYNDSKATNV GAALAAIEGL GADIDGKVVL IAGGDGKGAE
FKDLRDPVAT HCRAVILMGR DSDKIGEAIG DAVPLIRATT LVDAVAQCRA AAQPGDVVLL
SPACASFDMF NNYEDRGHQF VRAVEDLA
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