| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4671 |
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| Symbol | ddl |
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| ID | 3714571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 5272734 |
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| End bp | 5273708 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_350399 |
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| Protein GI | 77460892 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0129578 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.448814 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGCTG CCTACGCCAA TCTGTTCTCC ACCATCGCCC CGAAGGATTT CGGCCGTGTG
GCCGTGTTGT TCGGTGGCCT GAGTGCCGAG CGTGAAGTCT CGCTGAAGTC CGGCAATGCC
GTGCTCACTG CGCTGCAAAG CGCAGGTGTG GACGCGTTCG GCATCGACGT CGGCGCCGAC
ATTCTGCAGC GCCTGCTGAG CGAGAAGATC GACCGCGCGT TCATCATCCT CCACGGTCGT
GGCGGTGAAG ACGGCAGCAT GCAGGGCCTG CTCGAAGTGG CCGGCATTCC GTACACCGGC
AGTGGCATCC TGGCTTCGGC ACTGGCGATG GACAAGTTGC GCACCAAGCA GGTCTGGCAC
ACGCTCGGGA TTCCGACGCC GCGTCACGCC GTGCTGCGCA GCGAGGCCGA TTGTATTTCG
GCGGCGACGG AACTGGGCTT CCCTTTGATC GTCAAACCGG CGCATGAAGG TTCAAGTATC
GGGATGGCCA AAGTGAGTTC TGCGTCCGAG TTGATCGACG CATGGAAAGC GGCCAGTACC
TACGATTCGC AAGTGTTGGT CGAGCAATGG ATCCACGGTC CGGAGTTCAC CATCGCCACC
CTGCGTGACC AGGTGTTGCC TCCTATCGCC CTGGGTACGC CGCACACGTT CTACGACTAC
GACGCCAAGT ACATCGCCAA CGATACCCAG TATCGGATTC CGTGCGGGCT CGATGCCGCC
AAGGAAAAAG AACTCATGGA CCTCACGGCG CAAGCCTGCG AGGCGCTGGG TATTGCCGGT
TGGGGCCGGG CGGACGTGAT GCAGGACGCC GACGGCAAAT TCTGGTTCCT GGAAGTCAAC
ACCGCTCCCG GCATGACCGA TCACAGCCTG GTACCGATGG CGGCGAAAGC GGCCGGTCTG
GATTTCCAGC AGCTGGTCCT GGCCATTCTG GCCGCCAGTG TCGATGCCGA CGGCAAGAAA
GAGGCGCGAG GTTAA
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| Protein sequence | MTAAYANLFS TIAPKDFGRV AVLFGGLSAE REVSLKSGNA VLTALQSAGV DAFGIDVGAD
ILQRLLSEKI DRAFIILHGR GGEDGSMQGL LEVAGIPYTG SGILASALAM DKLRTKQVWH
TLGIPTPRHA VLRSEADCIS AATELGFPLI VKPAHEGSSI GMAKVSSASE LIDAWKAAST
YDSQVLVEQW IHGPEFTIAT LRDQVLPPIA LGTPHTFYDY DAKYIANDTQ YRIPCGLDAA
KEKELMDLTA QACEALGIAG WGRADVMQDA DGKFWFLEVN TAPGMTDHSL VPMAAKAAGL
DFQQLVLAIL AASVDADGKK EARG
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