Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4664 |
Symbol | |
ID | 3714382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5263403 |
End bp | 5264767 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | heavy metal sensor Signal transduction histidine Kinases (STHK) |
Protein accession | YP_350392 |
Protein GI | 77460885 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0247649 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.268867 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCAGTA ATTCCATTGC GCTGCGCTTG AGCGGGATGT TCACGCTGGT GGCGCTGCTG GTGTTCCTGT TGATCGGCGG CGCGCTGTAT CAACAAGTGG ACAAAGGCCT CGGCCTGCTG CCGGAAGCGG AGCTCGATGC GCGTTACAGC GTGCTGGAAT CCGCGCTCAA CCGCTATGGC ACCCCTGAGC ACTGGGTGAA GATCAACGCC AAGCTCAAGC TGCTCGGCGA AGAGGACAAG CGCATCCGCT TCTGGGTGGT CAGCGGCAAT CCGGGCTACG AGTTTGGCGA GCCGGATGCC TTGATCCGCG CGTTTGCCCA AGGCCCCTTG GGCATGCGCG ACCTGCAACT GCCCGACCAT CCTTATCCGC TGAAAGTGCT GCTCACCGAA TTGCCGGCCA AGGATCAACG CCCGCCGTTG CGCTTCATGA TCGGCATCGA CACCGAGACC TTTCACCAGA CCCAGCATCA GTTGCTGATC GCGCTGGTGA GTCTGGCGGT GATCGGTGTG CTACTGGCGT CGGCATTGGG TTACTGGGTG GCGCGGATCG GCCTCAAACC GTTGATCAAA CTGTCCCACG AAGCCCAGCG TCTGGCCCCG CCGTTGCGGG CCGGGCGCCT GCGTCTGTCA CCGTTGCCAC CGGAACTGGA GCAGTTCGTC GAGTCGTTCA ACTCGACGCT GGAGCGGGTC GAACAGGCGT ACTCGCGGCT GGAGTCATTC AACGCCGACG TCGCCCATGA ACTGCGCTCG CCACTGACCA ACCTGATCGG CCAGACCCAG GTCGCCCTGA CGCGCGGGCG CTCCGCCGAG CATTATTTCG AAGTGCTGCA ATCCAACCTC GAAGAGCTGG AACGCCTGCG CTCGATCATC AACGACATGC TGTTCCTGGC CAGCGCCGAT CAGGGCAGCA AGGCCACCAA ACTGACCTCG ACCTCGCTGG CCGATGAAGT GGCAACCACC CTCGAATACC TCGACTTCAT TCTCGAAGAT GCGCAGGTCC AGGTGCGGGT AAGCGGCGAC GCGCGGGTAC AGATCGAGAT CGCCCATCTG CGCCGGGCCT TGATCAATCT GCTGAGCAAC GCGGTGCAAC ACACGGCGCC CGGTCAGGTG ATCGAAGTAA AGATCGCGGC CGAGGAACAT CAGGTCAGCA TCGGCGTGGC CAACCCCGGT TTGCCGATTG CCAGCGAGCA TTTGCCGCGC TTGTTCGAGC GTTTCTACCG GGTCGATGCG TCGCGCAGCA ACAGCGGCAA CAATCACGGG TTGGGGCTGG CGATCGTCAA GGCGATTGCG CTGATGCACG GCGGCGATGT GTTTGTGCGC AGTGATCGCG GGATGAACAC CTTCGGGATC CACCTTCCGG TCTGA
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Protein sequence | MSSNSIALRL SGMFTLVALL VFLLIGGALY QQVDKGLGLL PEAELDARYS VLESALNRYG TPEHWVKINA KLKLLGEEDK RIRFWVVSGN PGYEFGEPDA LIRAFAQGPL GMRDLQLPDH PYPLKVLLTE LPAKDQRPPL RFMIGIDTET FHQTQHQLLI ALVSLAVIGV LLASALGYWV ARIGLKPLIK LSHEAQRLAP PLRAGRLRLS PLPPELEQFV ESFNSTLERV EQAYSRLESF NADVAHELRS PLTNLIGQTQ VALTRGRSAE HYFEVLQSNL EELERLRSII NDMLFLASAD QGSKATKLTS TSLADEVATT LEYLDFILED AQVQVRVSGD ARVQIEIAHL RRALINLLSN AVQHTAPGQV IEVKIAAEEH QVSIGVANPG LPIASEHLPR LFERFYRVDA SRSNSGNNHG LGLAIVKAIA LMHGGDVFVR SDRGMNTFGI HLPV
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