Gene Pfl01_4596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4596 
Symbol 
ID3713595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5196591 
End bp5197739 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content61% 
IMG OID 
Productputative aminotransferase 
Protein accessionYP_350324 
Protein GI77460817 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.438457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACCA GCAAGCTGCC GAATGTCGGC ATCACTATTT TCACGCAGAT GTCTCAGCTC 
GCGGCGCAGA CCGGAGCGAT CAACCTTTCC CAGGGTTTTC CCGATTTCGA CGGCCCGCAG
GCACTGCGCG ATGCAGTCGG TCGACACATC GCCAGCGGCC ATAACCAGTA TTCGCCCATG
ACCGGCCTGC CGGCGCTGCG CCAGCAGATC GCTGCGAAAA TCGCCCGCAG TTATGGCGCC
AACGTCGATG CCGACACTGA AGTGACCGTG ACCCCGGGCG CAACCCAGGC GATCTTCTGC
GCTATCCAAG CGGTTATCCG CACTGGCGAC GAAGTCATCG TGTTCGACCC GGCCTACGAC
AGCTACGAGC CGGCGGTGGA ACTGGCCGGC GGGCGCTGCG TGCATGTGCA GCTGGGCCTG
AAAGATTTCT CCATCGACTT CGACAGACTC AGCGCAGCCC TGAGCCCGCG CACGCGGATG
ATCATCCTCA ACACCCCGCA TAACCCGAGC GGTGCTTTGA TCAGTCGCGC CGAACTGGAT
CAGTTGGCGG CGTTGATCCG TGATCGCGAC ATCTATGTGA TCAGCGACGA AGTCTACGAA
CACCTGGTGT TCGACGGTGT GCCGCACGTC AGCGTGCTGG CCCATGAAGA GTTGTATCAG
CGCGCATTCG TGGTCAGCTC GTTCGGCAAG ACCTATCACG TCACAGGCTG GAAAACCGGT
TACGTCGTGG CGCCGCCGGC CCTGACGGCG GAGCTGCGCA AGGTGCACCA GTACGTCAGT
TTCTGCGGTG TGACACCGTT GCAGTATGCC CTGGCCGATT ACATGGCCGA GCATCCGGAA
CACGTTGAAG AGCTGCCAGG CTTCTATCAG GCCAAGCGCG ATCTGTTCTG TGATTTGCTC
GCGCCGTCGC GATTCAGCTT CACCCGGGTC ACCGGCACTT ATTTCCAACT GGTCGATTAC
TCGCAGATTC GCCCTGACCT GAACGATGTC GAGATGGCGA TGTGGATGAC CCGCGAGCAC
GGCGTGGCAA GTATTCCGGT GTCGGTGTTC TACCAGCATC CACCCGAAGG CCAGCGCTTG
GTGCGCCTGT GCTTTGCCAA ACGTGAGGAG ACGCTGCGGG AAGCGGCGGC CAAACTATGC
GTGATTTGA
 
Protein sequence
MITSKLPNVG ITIFTQMSQL AAQTGAINLS QGFPDFDGPQ ALRDAVGRHI ASGHNQYSPM 
TGLPALRQQI AAKIARSYGA NVDADTEVTV TPGATQAIFC AIQAVIRTGD EVIVFDPAYD
SYEPAVELAG GRCVHVQLGL KDFSIDFDRL SAALSPRTRM IILNTPHNPS GALISRAELD
QLAALIRDRD IYVISDEVYE HLVFDGVPHV SVLAHEELYQ RAFVVSSFGK TYHVTGWKTG
YVVAPPALTA ELRKVHQYVS FCGVTPLQYA LADYMAEHPE HVEELPGFYQ AKRDLFCDLL
APSRFSFTRV TGTYFQLVDY SQIRPDLNDV EMAMWMTREH GVASIPVSVF YQHPPEGQRL
VRLCFAKREE TLREAAAKLC VI