Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4596 |
Symbol | |
ID | 3713595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5196591 |
End bp | 5197739 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | putative aminotransferase |
Protein accession | YP_350324 |
Protein GI | 77460817 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.438457 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCACCA GCAAGCTGCC GAATGTCGGC ATCACTATTT TCACGCAGAT GTCTCAGCTC GCGGCGCAGA CCGGAGCGAT CAACCTTTCC CAGGGTTTTC CCGATTTCGA CGGCCCGCAG GCACTGCGCG ATGCAGTCGG TCGACACATC GCCAGCGGCC ATAACCAGTA TTCGCCCATG ACCGGCCTGC CGGCGCTGCG CCAGCAGATC GCTGCGAAAA TCGCCCGCAG TTATGGCGCC AACGTCGATG CCGACACTGA AGTGACCGTG ACCCCGGGCG CAACCCAGGC GATCTTCTGC GCTATCCAAG CGGTTATCCG CACTGGCGAC GAAGTCATCG TGTTCGACCC GGCCTACGAC AGCTACGAGC CGGCGGTGGA ACTGGCCGGC GGGCGCTGCG TGCATGTGCA GCTGGGCCTG AAAGATTTCT CCATCGACTT CGACAGACTC AGCGCAGCCC TGAGCCCGCG CACGCGGATG ATCATCCTCA ACACCCCGCA TAACCCGAGC GGTGCTTTGA TCAGTCGCGC CGAACTGGAT CAGTTGGCGG CGTTGATCCG TGATCGCGAC ATCTATGTGA TCAGCGACGA AGTCTACGAA CACCTGGTGT TCGACGGTGT GCCGCACGTC AGCGTGCTGG CCCATGAAGA GTTGTATCAG CGCGCATTCG TGGTCAGCTC GTTCGGCAAG ACCTATCACG TCACAGGCTG GAAAACCGGT TACGTCGTGG CGCCGCCGGC CCTGACGGCG GAGCTGCGCA AGGTGCACCA GTACGTCAGT TTCTGCGGTG TGACACCGTT GCAGTATGCC CTGGCCGATT ACATGGCCGA GCATCCGGAA CACGTTGAAG AGCTGCCAGG CTTCTATCAG GCCAAGCGCG ATCTGTTCTG TGATTTGCTC GCGCCGTCGC GATTCAGCTT CACCCGGGTC ACCGGCACTT ATTTCCAACT GGTCGATTAC TCGCAGATTC GCCCTGACCT GAACGATGTC GAGATGGCGA TGTGGATGAC CCGCGAGCAC GGCGTGGCAA GTATTCCGGT GTCGGTGTTC TACCAGCATC CACCCGAAGG CCAGCGCTTG GTGCGCCTGT GCTTTGCCAA ACGTGAGGAG ACGCTGCGGG AAGCGGCGGC CAAACTATGC GTGATTTGA
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Protein sequence | MITSKLPNVG ITIFTQMSQL AAQTGAINLS QGFPDFDGPQ ALRDAVGRHI ASGHNQYSPM TGLPALRQQI AAKIARSYGA NVDADTEVTV TPGATQAIFC AIQAVIRTGD EVIVFDPAYD SYEPAVELAG GRCVHVQLGL KDFSIDFDRL SAALSPRTRM IILNTPHNPS GALISRAELD QLAALIRDRD IYVISDEVYE HLVFDGVPHV SVLAHEELYQ RAFVVSSFGK TYHVTGWKTG YVVAPPALTA ELRKVHQYVS FCGVTPLQYA LADYMAEHPE HVEELPGFYQ AKRDLFCDLL APSRFSFTRV TGTYFQLVDY SQIRPDLNDV EMAMWMTREH GVASIPVSVF YQHPPEGQRL VRLCFAKREE TLREAAAKLC VI
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