Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4548 |
Symbol | |
ID | 3712586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5128386 |
End bp | 5129024 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | lysine exporter protein LysE/YggA |
Protein accession | YP_350276 |
Protein GI | 77460769 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.340064 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCCGC TTCAAGACCT GCTGATTTTT GCCGCCGCCG CCCTGCTGAT GGTACTGACG CCGGGGCCGA ACATGATCTA CCTGATCTCG CGTTCGATCT GTCAGGGACG CCGTGCCGGG GTGACTTCGC TGCTCGGCGT GGTGGCGGGG TTCTTTGTGC ATCTGTTCGC GGCGGCTGCC GGTTTGACTG CGGTGTTTCT CGCGGTGCCG ATGGCCTATG AAGTGTTGAA ATGGGCCGGT GCGCTGTACC TGTTGTGGCT GGCCTGGCAG GCGGTGAAGC CCGGCGCCCG TTCGCCATTC GAGGCGCAGC AACTGCCGGC GGATTCGTCG CGCAAACTGA TCACCATGGG CTTTCTAACC AGCGCCCTGA ACCCGAAAAT CGCGGTGTTC TACCTCTCGG TATTTCCGCA GTTCATTACC CCGGAACACG GCTCGGTGTT CACTCAAAGC ATCATTCTCG GCCTGACCCA GATCAGCGTC AGTTTCAGCG TCAATCTGTT GATCGCGCTG TTCGCGGCGG GCATCGCTTC GTGGTTCGTC AGCAATCCGA CCTGGCTGGC GGCGCAGCGT TATTTCATGG GGTTTGTGCT CGGCGGTCTG GCCGTACGGC TGATGCTTGA ACAACGCCGC TCGGCTTGA
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Protein sequence | MIPLQDLLIF AAAALLMVLT PGPNMIYLIS RSICQGRRAG VTSLLGVVAG FFVHLFAAAA GLTAVFLAVP MAYEVLKWAG ALYLLWLAWQ AVKPGARSPF EAQQLPADSS RKLITMGFLT SALNPKIAVF YLSVFPQFIT PEHGSVFTQS IILGLTQISV SFSVNLLIAL FAAGIASWFV SNPTWLAAQR YFMGFVLGGL AVRLMLEQRR SA
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