| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4540 |
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| Symbol | |
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| ID | 3712578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 5115368 |
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| End bp | 5116696 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | two component, sigma-54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_350268 |
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| Protein GI | 77460761 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.203781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.155775 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAACG ACCTCAGTGT ATTGATCGTC GAAGACGACC CCCATGTCCT GCTCGGCTGC
CAGCAGGCGC TGACCCTCGA AGACATCCCC TGCATCGGCG TCGGCAGTGG CGAAGAAGCG
CTGGAGCAGG TCGGCGACAA CTTCGCCGGG ATCGTCATCA GCGACATTCG CCTGCCGGGC
ATCGACGGCC TGGAACTGCT GACCCGGCTC AAGCAACGCG ACCGCAGCCT GCCGGTGGTG
CTGATCACCG GCCACGGCGA CATCTCCATG GCCGTCGGCG CGATGCAGAA AGGCGCCTAC
GACTTCATGG AAAAACCGTT CTCCCCTGAA CGACTGGTGG ACGTGGCCCG TCGTGCGCTG
GAGCAACGCA GCCTCAATCG CGAAGTTTCG TCCCTGCGCC GGCAACTGGC CGAACGCGAT
TCCCTTGAAG GGCGGATCAT CGGGCGTTCG CCGGCCATGC AGAACCTGCG CGAACTGATC
GCCAACGTCG CCGACACCTC GGCCAACGTA TTGATCGAAG GCGAGACCGG CACCGGCAAG
GAACTGGTCG CCCGCTGCCT GCACGATTTC AGCCGACGCC ACACCAAACA GTTCGTCGCG
CTGAACTGCG GCGGTCTGCC GGAAAACCTG TTCGAAAGCG AAATCTTCGG TCACGAAGCC
AACGCCTTCA CCGGCGCCGG CAAACGGCGG ATCGGCAAGA TCGAGCACGC CGACGGCGGC
ACGCTGTTCC TCGACGAAGT GGAAAGCATG CCGCTGCCGT TGCAGATCAA ACTGCTGCGG
GTGTTGCAGG AGCGCACCCT CGAACGCCTC GGCTCGAACC AGAGCGTGGC GGTGGATTGC
CGGGTGATTG CGGCCACCAA GTCCGACCTC GACGAGTCGA GCAAGGCCGG GGAATTTCGC
AGTGACTTGT ACTACCGCCT CAACGTGGTG ACGCTGGAAC TGCCGCCCCT GCGCGAACGC
CGCGAAGACA TCCTGCAACT GTTCGAACAC TTCACCCAGC AATCGGCCCT GCGTTTCGAC
CGGGCGCTGC CGGAGCTGGA CAACCAGACG TTGTCGAGCC TGATGAGCCA CGACTGGCCG
GGCAACGTGC GCGAACTGCG CAACGTCGCC GAGCGTTTTG CCCTCGGTTT GCCGGCGTTC
AAGAAAACCG GCGCGGGCAG CGCAGGTCAG GGCCTGGCGT TCGCCGAAGC GGTGGAAGCG
TTCGAACGCA ACCTGCTCAG CGACGCCCTG CAACGCAGCG GCGGCAACCT GACCCAGGCC
AGCCTGGAAC TGGGCATGGC CAAGACCACG CTGTTCGACA AAGTGAAAAA ATACGGCCTG
AGCCATTAA
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| Protein sequence | MNNDLSVLIV EDDPHVLLGC QQALTLEDIP CIGVGSGEEA LEQVGDNFAG IVISDIRLPG
IDGLELLTRL KQRDRSLPVV LITGHGDISM AVGAMQKGAY DFMEKPFSPE RLVDVARRAL
EQRSLNREVS SLRRQLAERD SLEGRIIGRS PAMQNLRELI ANVADTSANV LIEGETGTGK
ELVARCLHDF SRRHTKQFVA LNCGGLPENL FESEIFGHEA NAFTGAGKRR IGKIEHADGG
TLFLDEVESM PLPLQIKLLR VLQERTLERL GSNQSVAVDC RVIAATKSDL DESSKAGEFR
SDLYYRLNVV TLELPPLRER REDILQLFEH FTQQSALRFD RALPELDNQT LSSLMSHDWP
GNVRELRNVA ERFALGLPAF KKTGAGSAGQ GLAFAEAVEA FERNLLSDAL QRSGGNLTQA
SLELGMAKTT LFDKVKKYGL SH
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