| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4521 |
|---|
| Symbol | |
|---|
| ID | 3717890 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 5095730 |
|---|
| End bp | 5096332 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | |
|---|
| Product | Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
|---|
| Protein accession | YP_350249 |
|---|
| Protein GI | 77460742 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.725176 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0250136 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTAC TCGTAGGCAA ACAAGCCCCT GACTTCACCG TCCCGGCCGT ACTCGGCAAT
GGCGAGATCG TTGACAGCTT CACCCTGTCC TCGGCCATCA AAGGCAAATA CGGCCTGGTG
TTCTTCTACC CGCTGGACTT CACCTTTGTC TGCCCGTCCG AGCTGATCGC TCTGGACAAC
CGCATGGCCG ACTTCAAGGC ACGCAACGTT GAAGTAGTCG CCGTTTCGAT CGACTCGCAC
TTCACCCACA ACGCCTGGCG CAACACACCG GTCAACAATG GCGGCATCGG CCAGGTGAAA
TACACCATGG CTGCCGACAT GAAGCACGAA ATCGCCAAGG CCTACGACGT TGAGTCCGAA
GGCGGCGTGG CTTTCCGTGG CGCGTTCCTG ATCGATGACA AAGGCGTTGT CCGCTCGCAG
ATCATCAACG ACCTGCCGCT GGGCCGTAAC ATGGAAGAGC TGATCCGTCT GGTCGACGCT
CTGCAATTCC ACGAAGAGCA CGGCGAAGTC TGCCCTGCCA ACTGGAAAAA AGGCGACAAA
GGCATGAACG CTTCGCCAGA AGGCGTTGCG GCTTACCTGA CCGAGAACGC TGCTGCCCTG
TAA
|
|---|
| Protein sequence | MSVLVGKQAP DFTVPAVLGN GEIVDSFTLS SAIKGKYGLV FFYPLDFTFV CPSELIALDN
RMADFKARNV EVVAVSIDSH FTHNAWRNTP VNNGGIGQVK YTMAADMKHE IAKAYDVESE
GGVAFRGAFL IDDKGVVRSQ IINDLPLGRN MEELIRLVDA LQFHEEHGEV CPANWKKGDK
GMNASPEGVA AYLTENAAAL
|
|---|
| |