Gene Pfl01_4519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4519 
Symbol 
ID3717888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5093938 
End bp5094984 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content64% 
IMG OID 
Productdihydroorotase 
Protein accessionYP_350247 
Protein GI77460740 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0255572 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACC GCCTGACCCT GCTGCGTCCC GACGACTGGC ACATTCATCT TCGCGATGGT 
GCCGTGTTGA CCAATACCGT TGCGGATGTC GCGCGCACCT TTGGTCGCGC CATCATCATG
CCCAACCTGG TACCTCCGGT GCGCAACGCC GCTGAAGCCG ACGGCTATCG CCAGCGGATT
CTCGCTGCCC GCCCGGCCGG CAGTCGTTTC GAACCGCTGA TGGTGCTGTA CCTCACCGAC
CGCACCCAGC CCGAAGAAAT CCGTGAGGCC AAGGCCAGCG GTTTCGTGCA CGCCGCCAAG
CTGTATCCGG CTGGCGCCAC CACCAACTCC GATTCCGGGG TCACCAGCAT CGACAAGATT
TTCCCGGTGC TGGAAGCCAT GGCCGAAGCC GGCATGCCGC TGTTGATCCA CGGCGAAGTC
ACCCGTGGCG ACGTCGACGT GTTCGACCGC GAAAAAATCT TCATCGACGA GCACATGCGC
CGCGTGGTCG AGCGTTTCCC GACACTGAAA GTGGTGTTCG AACACATCAC CACCGGCGAT
GCCGTGCAGT TCGTCAACGA GGCTTCGGCC AACGTCGGCG CGACCATCAC CGCGCATCAC
CTGCTCTACA ACCGCAACCA CATGCTGGTG GGCGGGATCC GGCCGCACTT CTATTGCCTG
CCGATCCTCA AACGCAACAC TCACCAGGAA GCCCTGCTCG ACGCCGCCAC CAGCGGCAGC
GCGAAGTTCT TCCTCGGTAC CGACTCGGCA CCGCACGCCC AGCACGCCAA GGAAGCCGCC
TGCGGCTGCG CCGGCTGCTA CACCGCGTAC GCCGCCATCG AGCTGTATGC CGAAGCCTTT
GAACAGCGCA ACGCGCTGGA CAAGCTCGAA GCCTTCGCCA GCCTCAACGG CCCGCGTTTC
TACGGTCTGC CGGCGAACAC CGATCGCATC ACACTGGTTC GTGACGAATG GACCGCCCCG
ACCAGCCTGC CTTTCGGCGA GCTGACCGTT ATCCCGCTGC GCGCCGGTGA AAAACTGCGC
TGGCGCCTGC TGGAGGAACA CGCGTGA
 
Protein sequence
MSDRLTLLRP DDWHIHLRDG AVLTNTVADV ARTFGRAIIM PNLVPPVRNA AEADGYRQRI 
LAARPAGSRF EPLMVLYLTD RTQPEEIREA KASGFVHAAK LYPAGATTNS DSGVTSIDKI
FPVLEAMAEA GMPLLIHGEV TRGDVDVFDR EKIFIDEHMR RVVERFPTLK VVFEHITTGD
AVQFVNEASA NVGATITAHH LLYNRNHMLV GGIRPHFYCL PILKRNTHQE ALLDAATSGS
AKFFLGTDSA PHAQHAKEAA CGCAGCYTAY AAIELYAEAF EQRNALDKLE AFASLNGPRF
YGLPANTDRI TLVRDEWTAP TSLPFGELTV IPLRAGEKLR WRLLEEHA