Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4515 |
Symbol | |
ID | 3717774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5089748 |
End bp | 5090374 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_350243 |
Protein GI | 77460736 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00786387 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATAAAG TGCTGATCGT GGATGATCAC CCCGTCATTC GTCTTGCGGT ACGTATGCTG ATGGAACGTC ATGGCTACGA AGTCATTGCA GAAACGGATA ACGGCGTGGA TGCATTACAA CTTGCTCGTG ACCAGATGCC GGATATCGTC ATTCTGGATA TCGGCATACC GAAACTGGAT GGTCTGGAAG TCATTGCGCG TCTTACGACC ATTGCAATGC CATTGAAGGT GCTGGTGCTG ACGTCCCAGT CACCGGGACA TTTTTCCATG CGCTGCATGC AGTCGGGGGC GGCGGGCTAT GTCTGCAAGC AACAGGATCT GACGGAGTTG CTGAGTGCCA TCAAGGCGGT ACTGTCCGGA TACAGCTATT TTCCGAATCA GGCGCTGCAT ACCGTGCGGA CCAGCCTTGG AAACGCCAGC GAAGCGGACA TGGTCGATCG CCTGTCCGGG AGGGAAATGA TGGTGTTGCA GCAGTTGGCG CGCGGCAAGA CCAACAAGGA AATTGCCGAC GGAATGTTCC TCAGCAACAA GACCGTGAGT ACCTACAAAA CCCGGTTACT ATTGAAGCTC AACGCGCGCT CGCTGGTGGA TCTGATCGAA CTGGCGCAGC GAAACGGTCT GGTCTGA
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Protein sequence | MNKVLIVDDH PVIRLAVRML MERHGYEVIA ETDNGVDALQ LARDQMPDIV ILDIGIPKLD GLEVIARLTT IAMPLKVLVL TSQSPGHFSM RCMQSGAAGY VCKQQDLTEL LSAIKAVLSG YSYFPNQALH TVRTSLGNAS EADMVDRLSG REMMVLQQLA RGKTNKEIAD GMFLSNKTVS TYKTRLLLKL NARSLVDLIE LAQRNGLV
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