| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4508 |
|---|
| Symbol | |
|---|
| ID | 3717767 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 5084807 |
|---|
| End bp | 5085376 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | |
|---|
| Product | electron transport complex protein RnfA |
|---|
| Protein accession | YP_350236 |
|---|
| Protein GI | 77460729 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.00030992 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAC TCGTGCTTAC GCTCTTCAGT GCTGCGCTGA TCAACAACTT CGTGTTGCAC
TGGCCGCTGG GCGTCGTTCC GCTGCTGGGC AGTGAGCGTC GACAAGTGCA TGCGCTGGGG
CTGGCAACGT TGTGTCTGAT GCTGCTTGTC GGTGTGGCGG GTTACGTGCT CTGGCATTGG
CTACTGGTGC CGTTGCAACT GGAATTCCTG CGCCTGTTTG TGTTTATGCC GTTGAGCATC
TTGCTGATCA CGCCGTTGCT GAAGCTGTTG GCGCATTGGC TCCCGGCGTT GCCATTCGAT
GGTTTGTGGC CGCTGCTGCT GGGCAATGCC GGTGTGCTGG GGCTGATACT GATCAACGCG
CAAGCGGACA AAGGCCTGTT TCATGCAATT GCGCTGAGCC TTGGCGCCGG CCTGGGTTTC
TGGCTGGTGT TGAGCCTGTT CAGCGATTTG CGTGAGCGCA CGGCCGACAA CGATATTCCC
CTGCCCTTTC GTGGCCTGCC GATCCTGTTG ATCGGCGCCG GACTGATGGC CGTGGCTTTT
CTCGGATTCA GTGGACTGAT CAAAACATGA
|
|---|
| Protein sequence | MTELVLTLFS AALINNFVLH WPLGVVPLLG SERRQVHALG LATLCLMLLV GVAGYVLWHW
LLVPLQLEFL RLFVFMPLSI LLITPLLKLL AHWLPALPFD GLWPLLLGNA GVLGLILINA
QADKGLFHAI ALSLGAGLGF WLVLSLFSDL RERTADNDIP LPFRGLPILL IGAGLMAVAF
LGFSGLIKT
|
|---|
| |