Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4504 |
Symbol | |
ID | 3717763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5079655 |
End bp | 5080386 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | pyridoxamine 5'-phosphate oxidase-like, FMN-binding |
Protein accession | YP_350232 |
Protein GI | 77460725 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000287779 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | TTGAGCGTTG AAGCGGCTAA GAATGCCCGA GAATTGCTTC TCAAGGAATA CCGTGGCGTG CTGTCGACCC ACTCCAGATC GATGCCCGGT TTCCCGTTCG GCTCCGTGGT TCCCTACTGC CTTGACGAGC AGGGCCGGCC GCTGATCCTG ATCAGCCGTA TCGCCCAGCA CACCCACAAC CTGCAGAAAG ATCCGAAATG TTCGCTGCTG GTGGGTGAGC GCGAGGCCGA CGATGTGCAA GCCGTTGGTC GCCTGACCTA TCTGGCCGAG GCGGAAAAAC TCGAAGACGC GGCCGCCATC GAAGCTGCCG CCGAGCGCTA CTACCGTTAT TTCCCCGATT CGCAGAATTA CCACAAGGCC CACGATTTCG ATTTCTGGGT GCTCAAACCG GTGCGTCATC GCTACATCGG CGGTTTTGGC GCGATCCATT GGGTCGATCA CCTGACCCTG GCCAACCCGT TCGCCGGCAA GGCCGAAGTC AGCATGGTCG AGCACATGAA CAGCGACCAC GCCAAGGCCA TTGCGCATTA CGTCGACCTC GCCGGCCTGC CGAAAACCGT CCCGGCGCAA CTGGCCGGGA TCGACACCGA AGGCATGCAC TTGCGCATCG GTCAGGCGCT GTACTGGCTG CCGTTTCAAG CGCCTTGTCA TACGCCGATA CAAGTGCGCG AGGCCTTGGT TTCTCTGGCT CACGCCGAGG TCTGGCCAAA AAATGCGGGG GCCGACGCTT GA
|
Protein sequence | MSVEAAKNAR ELLLKEYRGV LSTHSRSMPG FPFGSVVPYC LDEQGRPLIL ISRIAQHTHN LQKDPKCSLL VGEREADDVQ AVGRLTYLAE AEKLEDAAAI EAAAERYYRY FPDSQNYHKA HDFDFWVLKP VRHRYIGGFG AIHWVDHLTL ANPFAGKAEV SMVEHMNSDH AKAIAHYVDL AGLPKTVPAQ LAGIDTEGMH LRIGQALYWL PFQAPCHTPI QVREALVSLA HAEVWPKNAG ADA
|
| |