| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4493 |
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| Symbol | |
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| ID | 3717752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 5067020 |
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| End bp | 5070049 |
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| Gene Length | 3030 bp |
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| Protein Length | 1009 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | multidrug efflux protein |
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| Protein accession | YP_350221 |
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| Protein GI | 77460714 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0361963 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTTTA CCGATCCGTT CATCCGCCGC CCGGTGCTCG CCACCGTGGT CAGCCTGCTG
ATTGTGCTGC TGGGCTTTCA GGCCTGGAGC AAGCTGCCGC TGCGCCAGTA CCCGCAAATG
GAAAACGCCC TGATCACGGT GACCACCGCG TACCCCGGGG CCAACGCCGA AACCATCCAG
GGCTATATCA CCCAGCCGAT GCAACAGAGC CTGGCCAGCG CCGAGGGCAT CGACTACATG
ACCTCGGTCA GTCGCCAGAA CTTCTCGGTG ATTTCGATCT ACGCGCGCAT CGGCTCCAAC
AGCGACCGCC TGTTCACCGA ACTGCTGGCC AAGGCCAACG AGGTGAAGAA CAAACTGCCT
CAGGATGCCG AAGACCCGGT GCTGAGCAAA GAAGCCGCCG ATGCCTCGGC GCTGATGTAC
ATCAGCTTCT TCAGCAAGGA ACTGAACAAT CCGCAGATCA CCGACTACCT GTCGCGGGTG
ATACAGCCGA AGCTGGCGAC CCTGCCGGGC ATGGCCGAAG CGGAAATTCT CGGCAATCAG
GTGTTCGCCA TGCGCCTGTG GATCGACCCG GTGAAACTCG CCGGCTTCGG CCTCAGTGCC
AGTGACGTGA CCAACGCGGT GCGCCAGTAC AACTTCCTCT CCGCCGCCGG CGAGGTGAAA
GGCGAGTACG TGGTCACCAG CATCAACGCC AACACCGAAC TGAAGTCCGC CGAAGCCTTC
GGCAAGATCC CGCTCAAGGT CAGCGGTGAC AGCCGGGTAC TGCTCAGCGA TGTGGCGCGG
GTCGAGATGG GCGCGGAAAA CTACAACTCG ATCAGTTCGT TCGGCGGAAC GCCTTCGGTG
TACATCGGGA TCAAGGCCAC GCCCGGCGCC AACCCGCTGG ACGTGATCAA GGAAGTGCGC
AAGATCATGC CGGAGCTGGA AGCCCAGCTG CCGCCCAACC TCAAGAGCGA AATCGCCTAC
GATGCCACGC TGTTCATTCA GGCCTCCATC GACGAGGTAG TGAAAACCCT GTTCGAGGCG
GTGCTGATCG TGATCGTGGT GGTGTTCCTG TTCCTCGGCG CCCTGCGTTC GGTAGTGATT
CCGGTGGTGA CCATTCCGCT GTCGATGATC GGCGTGATGT TCTTCATGCA GATGATGGGC
TACTCGATCA ACCTGCTGAC CCTGCTGGCG ATGGTGCTGG CCATCGGGCT GGTGGTCGAC
GACGCGATTG TGGTGGTGGA AAACATCCAC CGGCACATCG AGGAAGGCAA GACACCACTG
GAAGCCGCGC TCGAAGGCGC CCGGGAAATC GCCATGCCGG TGGTGTCGAT GACCATCACC
CTCGCGGCGG TGTACGCACC GATCGGTTTC CTGACCGGGC TGACCGGGGC GCTGTTCAAG
GAATTTGCGT TGACCCTGGC CGGGGCGGTG GTGATCTCCG GCGTCGTCGC CCTGACCCTG
TCGCCGATGA TGTGCGCCAT GCTGCTGCGC CATGACGAAA ATCCCACGGG TCTGGCCCAC
CGCCTCGACC GGATTTTCGA CAGCCTCAAG CGGCGCTATC AGCGCATGCT GCACGGCACG
CTCAACACCC GGCCGGTGGT GCTGGTGTTT GCGGTGATCG TGCTGTGCCT GATTCCGGTG
CTGCTCAAGT TCACCAAGTC GGAACTGGCA CCGGACGAGG ATCAGGGCAT CATCTTCATG
ATGGCCAACG CGCCGCAGCC AACCAACCTC GACTACCTGA ACACCTACAC CGACGAGTTC
ATCAAGATCT TCAAGGAGTT CCCGGAGTAC TATTCATCGT TCCAGATCAA CGGCTATAAC
GGCGTGCAGA GCGGCATCGG CGGCTTCCTG CTCAAGCCGT GGAACGAGCG CAGCCGCACG
CAAATGGAAA TTCTCCCCGA GGTGCAGGGC AAACTCGAGG GCATTCCGGG CCTGCAGATC
TTCGGTTTCA ACCTGCCATC CCTGCCCGGC ACCGGTGAAG GTCTGCCGTT CGAATTCGTG
ATCAACACCG CCAACGACTA CGAGCTGTTG CTGCAAGTGG CCGACCGGAT CAAGAAGCGC
GCCATGGAGT CAGGCAAGTT CGCCTTCGTC GACCTTGACC TGGCCTTCGA CAAACCCGAA
GTGGTGGTTG ACATCGACCG CGCCAAGGCA GCGCAGATGG GCGTGTCGAT GCAGGATCTG
GGCGGCACCC TCGCGACCTT GCTCGGCGAA GCCGAGATCA ACCGGTTCAC CATCGAAGGC
CGCAGTTACA AGGTCATCGC CCAGGTCGAA CGGGCCTACC GCGACAACCC GGACTGGCTG
AACAATTACT ACGTGAAAAA CACCCAGGGC GAACTGCTGC CGCTGTCGAC CCTGATCACC
GTGACCGACC GCGCGCGACC GCGACAACTC AACCAGTTCC AGCAACTCAA CGCGGCCAAG
CTGTCCGGAT TCCCGCTGGT GAGCATGGGG GAAGCCATCG ACAGTGTGCT GCAGATCGCC
CGGGAGGAAG CCCCGGCCGG TTTTGCCTTC GATTACGGCG GCGCCTCCCG GCAGTTCGTC
CAGGAAGGCA GTGCGCTGTG GGTGACTTTC GCGTTAGCAC TGGCGATCAT TTTCCTGGTG
CTGGCGGCGC AGTTCGAAAG CTTCCGCGAT CCATTGGTGA TTCTGGTGAC CGTGCCGCTG
TCGATCTGCG GGGCGCTGAT TCCGCTGTTC CTCGGCTGGT CGAGCATGAA CATCTACACC
CAGGTCGGAC TGGTGACGCT GATCGGGCTG ATCAGCAAGC ACGGGATCCT GATCGTCGAG
TTCGCCAACC AGTTGCGCAA AGACAAGGGC CTGACACCCC GCGAGGCAGT GGAGGAAGCG
GCGGCAATCC GCCTGCGCCC GGTGTTGATG ACCACAGCGG CGATGGTGTT CGGCATGGTG
CCGCTGATCG TGGCCACCGG CGCCGGTGCC GTCAGCCGTT TCGATATCGG GACGGTAATT
GCCACGGGGA TGTCGATCGG TACGCTGTTT ACGCTGTTTG TCCTGCCGTG CGTTTACACC
GTTCTGGCGA AACCCGACCC CAGGGAATGA
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| Protein sequence | MAFTDPFIRR PVLATVVSLL IVLLGFQAWS KLPLRQYPQM ENALITVTTA YPGANAETIQ
GYITQPMQQS LASAEGIDYM TSVSRQNFSV ISIYARIGSN SDRLFTELLA KANEVKNKLP
QDAEDPVLSK EAADASALMY ISFFSKELNN PQITDYLSRV IQPKLATLPG MAEAEILGNQ
VFAMRLWIDP VKLAGFGLSA SDVTNAVRQY NFLSAAGEVK GEYVVTSINA NTELKSAEAF
GKIPLKVSGD SRVLLSDVAR VEMGAENYNS ISSFGGTPSV YIGIKATPGA NPLDVIKEVR
KIMPELEAQL PPNLKSEIAY DATLFIQASI DEVVKTLFEA VLIVIVVVFL FLGALRSVVI
PVVTIPLSMI GVMFFMQMMG YSINLLTLLA MVLAIGLVVD DAIVVVENIH RHIEEGKTPL
EAALEGAREI AMPVVSMTIT LAAVYAPIGF LTGLTGALFK EFALTLAGAV VISGVVALTL
SPMMCAMLLR HDENPTGLAH RLDRIFDSLK RRYQRMLHGT LNTRPVVLVF AVIVLCLIPV
LLKFTKSELA PDEDQGIIFM MANAPQPTNL DYLNTYTDEF IKIFKEFPEY YSSFQINGYN
GVQSGIGGFL LKPWNERSRT QMEILPEVQG KLEGIPGLQI FGFNLPSLPG TGEGLPFEFV
INTANDYELL LQVADRIKKR AMESGKFAFV DLDLAFDKPE VVVDIDRAKA AQMGVSMQDL
GGTLATLLGE AEINRFTIEG RSYKVIAQVE RAYRDNPDWL NNYYVKNTQG ELLPLSTLIT
VTDRARPRQL NQFQQLNAAK LSGFPLVSMG EAIDSVLQIA REEAPAGFAF DYGGASRQFV
QEGSALWVTF ALALAIIFLV LAAQFESFRD PLVILVTVPL SICGALIPLF LGWSSMNIYT
QVGLVTLIGL ISKHGILIVE FANQLRKDKG LTPREAVEEA AAIRLRPVLM TTAAMVFGMV
PLIVATGAGA VSRFDIGTVI ATGMSIGTLF TLFVLPCVYT VLAKPDPRE
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