Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4411 |
Symbol | aspS |
ID | 3713314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4970037 |
End bp | 4971812 |
Gene Length | 1776 bp |
Protein Length | 591 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | aspartyl-tRNA synthetase |
Protein accession | YP_350139 |
Protein GI | 77460632 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00200172 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCGCA GCCATTATTG CGGCCAACTG AACGAAAGCC TGGAAGGCCA GGAAATTACC CTTTGCGGAT GGGTTCACCG TCGTCGCGAC CACGGCGGGG TGATTTTCCT CGATATCCGT GATCGTGACG GTCTGGCCCA GGTAGTGTTC GATCCGGATC GCGCCGAGAG CTTCGCCGCC GCCGATCGCG TGCGCAGCGA ATACGTCGTG AAGATCACCG GCAAGGTGCG TCTGCGTCCG GCCGGTGCCA CCAACGCCAA TATGGCGTCG GGCATGATCG AAGTGCTGGG CTACGAACTG GAAGTGCTGA ACGAGTCGGA AACCCCGCCG TTCCCGCTGA ACGAGTTCTC CGACGTCGGC GAAGAAACCC GCCTGCGTTA TCGCTTCCTG GACCTGCGTC GTCCGGAGAT GGCCGAGAAG CTGCGTCTGC GCTCGCGTAT GACCACCAGT ATCCGTCGCT ATCTGGACGA GAACGGCTTC CTCGACGTCG AAACGCCGAT CCTGACCCGT GCCACTCCGG AAGGCGCGCG CGACTACCTC GTACCGAGCC GTACCCACGC CGGCTCGTTC TTCGCGCTGC CGCAATCGCC ACAGCTGTTC AAGCAACTGC TGATGGTCGC CGGCTTCGAC CGTTACTACC AGATCGCCAA GTGCTTCCGC GACGAAGACC TGCGTGCCGA CCGCCAGCCT GAGTTCACTC AGATCGACAT CGAGACCAGC TTCCTCGACG AAAAAGACAT CATGGGCCTG ACCGAAGGCA TGATCCGCAA CCTGTTCAAG GAAGTGCTGG ATCTGGAATT CGGCGAATTC CCGCACATGA CATTCGAAGA AGCCATGCGC CGTTACGGTT CCGACAAGCC GGATCTGCGT AACCCGCTGG AGCTGGTCGA CGTGGCCGAT CAGCTGAAAG AAGTGGATTT CAAGGTCTTC AGCGGCCCTG CCAACGATCC GAAATGCCGT ATCGCCGCAC TGCGCGTTCC AGGCGGGGCG AGCATGCCGC GCAAGCAGAT CGACGACTAC ACCAAGTTCG TCGGCATCTA CGGTGCCAAG GGTCTGGCGT ACATCAAGGT CAACGAGCGT GCTGCCGGTG TTGAAGGTCT GCAATCGCCG ATCGTGAAAA ACATCCCGGA AGCCAACCTG AACGTGATCC TCGACCGCGT TGGCGCAGTC GACGGCGACA TCGTGTTCTT CGGCGCCGAC AAGGCCAAGA TCGTCAGCGA AGCCCTGGGC GCGCTGCGTA TCAAGCTCGG TCACGACCTG AAGCTGCTGA CCTGCGAATG GGCTCCGATG TGGGTTGTCG ACTTCCCGAT GTTCGAAGAG AACGACGACG GCAGCTTCTC CGCGCTGCAC CACCCGTTCA CCGCACCGAA GTGCTCGCCG GAAGAGCTGG AAGCCAACCC GGCCGGCGCT CTGTCCCGTG CCTACGACAT GGTGCTGAAC GGCACCGAAC TGGGTGGCGG TTCGATCCGT ATCCACCGTA AAGAGATGCA ACAGGCGGTG TTCCGTCTGC TGGGCATCAA CGAAGCGGAA CAGGAAGAGA AGTTCGGCTT CCTGCTCGAC GCCCTGAAAT ACGGCGCACC GCCACACGGT GGTCTGGCCT TCGGTCTGGA CCGTCTGGTG ATGCTGATGA CTGGCGCCCA GTCGATCCGT GAAGTGATCG CCTTCCCGAA AACCCAGAGT GCTGCCGACG TGATGACGCA GGCGCCGGGT GTCGTGGACG CGAAGGCATT GCGCGAACTG CACATTCGTT TGCGCGAAAC GCCGAAGGCT GAGTAA
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Protein sequence | MMRSHYCGQL NESLEGQEIT LCGWVHRRRD HGGVIFLDIR DRDGLAQVVF DPDRAESFAA ADRVRSEYVV KITGKVRLRP AGATNANMAS GMIEVLGYEL EVLNESETPP FPLNEFSDVG EETRLRYRFL DLRRPEMAEK LRLRSRMTTS IRRYLDENGF LDVETPILTR ATPEGARDYL VPSRTHAGSF FALPQSPQLF KQLLMVAGFD RYYQIAKCFR DEDLRADRQP EFTQIDIETS FLDEKDIMGL TEGMIRNLFK EVLDLEFGEF PHMTFEEAMR RYGSDKPDLR NPLELVDVAD QLKEVDFKVF SGPANDPKCR IAALRVPGGA SMPRKQIDDY TKFVGIYGAK GLAYIKVNER AAGVEGLQSP IVKNIPEANL NVILDRVGAV DGDIVFFGAD KAKIVSEALG ALRIKLGHDL KLLTCEWAPM WVVDFPMFEE NDDGSFSALH HPFTAPKCSP EELEANPAGA LSRAYDMVLN GTELGGGSIR IHRKEMQQAV FRLLGINEAE QEEKFGFLLD ALKYGAPPHG GLAFGLDRLV MLMTGAQSIR EVIAFPKTQS AADVMTQAPG VVDAKALREL HIRLRETPKA E
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