Gene Pfl01_4408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4408 
SymbolruvA 
ID3713311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4967775 
End bp4968383 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content59% 
IMG OID 
ProductHolliday junction DNA helicase RuvA 
Protein accessionYP_350136 
Protein GI77460629 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0615399 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGGAC GCTTGCGCGG TACTCTGGCT GAGAAACAGC CGCCGCACCT GATTCTGGAT 
GTAAACGGCC TCGGGTATGA GCTGGAAGTG CCCATGACCA CCCTTTATCG TCTGCCGTCG
GTCGGTGAAC CGCTGACCTT GCACACCCAT TTGGTCGTAC GCGAAGACGC ACAGTTACTC
TATGGTTTTG CCGGCAAGCG TGAGCGAGAC TTTTTTCGCG AGTTGATCCG TCTCAACGGT
GTAGGGCCGA AACTGGCCCT GGCCTTGATG TCGAGTCTGG AAGTCGACGA ACTGATCCGC
TGCGTACAGT CCCAGGACAC CTCGGCGCTG ACTAAGGTGC CGGGCGTGGG CAAGAAAACC
GCCGAGCGTC TGCTGGTCGA GCTCAAGAAT CGCTTCAAGG CCTGGGAAAC GTCGCCGGCC
ATGTTCGCGC TGGTGCCGAA CCAGCCGGAC GGCCCGGCGC CAGTCAATAC GGCCGAGAAC
GATGCGGTCA GCGCGCTGAT TTCCCTGGGC TACAAGCCAC AGGAAGCGAG CAAGGCGATT
TCCGCGATCA AAGAGAAAGG CCTGAGCAGC GAAGACATGA TTCGACGCGC CCTGAAGGGA
ATGATTTAA
 
Protein sequence
MIGRLRGTLA EKQPPHLILD VNGLGYELEV PMTTLYRLPS VGEPLTLHTH LVVREDAQLL 
YGFAGKRERD FFRELIRLNG VGPKLALALM SSLEVDELIR CVQSQDTSAL TKVPGVGKKT
AERLLVELKN RFKAWETSPA MFALVPNQPD GPAPVNTAEN DAVSALISLG YKPQEASKAI
SAIKEKGLSS EDMIRRALKG MI