Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4393 |
Symbol | |
ID | 3712836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4954353 |
End bp | 4955729 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | L-serine ammonia-lyase |
Protein accession | YP_350121 |
Protein GI | 77460614 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.215998 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGTTAA GCGTGTTCGA CCTGTTCAAG ATTGGCATCG GCCCCTCCAG CTCCCACACC GTCGGCCCGA TGCGCGCAGC TGCGCGCTTC GTGGAAGGTC TGCGCCGGGA AAACCTGTTG TCGGCCACCA CCAGCGTCAG GGTCGAGTTG TATGGATCCC TCGGCGCCAC GGGCAAGGGT CACGGCAGCG ACAAGGCCGT GCTGCTGGGC CTGGAAGGTG AACACCCGGA CACCGTGGAT ACTGAAACCG TCGCCGCCCG TCTCGCGGAG ATTCGTGGCA ACGGGCGTTT GATCCTGCTC GGTGAACACA GCATTGCGTT CAACGAGAAA GAACACCTGG CAATGATCCG CAAGCCGTTG GCCTATCACC CCAACGGCAT GATCTTCCGC GCCTTCGATG CGGCGGGATT GCAGATCCGC AGCCGCGAGT ACTACTCGGT CGGCGGTGGG TTTGTGGTCG ACGAAGACGC GGCCGGCGCC GACCGGATCG TCGAAGACGC CACCCCGCTG ACCTTCCCGT TCAAAAGTGC CAAGGACTTG CTCGGTCATT GCGCCACCTA TGGTCTGTCG ATCAGTCAGG TGATGCTGGC CAACGAAAGC GCCTGGCGCC CGGAGGCGGA AACCCGTGCC GGCCTGCTGA AAATCTGGCA AGTGATGCAG GACTGTGTGG CCGCCGGCTG TCGCAACGAA GGCATTCTGC CGGGTGGCCT CAAGGTCAAG CGGCGGGCGG CGGCGTTGCA CCGGCAACTG TGCAAGAACC CGGAATCGTC GCTGCGCGAT CCGCTGTCGG TGCTGGACTG GGTCAACCTC TACGCCCTCG CTGTCAACGA AGAAAACGCC AACGGCGGGC GCGTGGTCAC GGCACCGACC AACGGCGCGG CGGGGATCAT TCCTGCGGTG CTGCATTACT ACATGCGCTT CATTCCCGGC GCGAACGATG ACGGCGTGGT GCGTTTCCTG CTCACCGCCG CGGCCATCGG CATTCTGTAC AAGGAAAACG CCTCGATTTC CGGTGCCGAA GTCGGCTGTC AGGGCGAGGT CGGCGTGGCC TGTTCGATGG CGGCCGGCGC GTTGTGCGAA GTCCTCGGCG GCAGCGTGCA ACAAGTGGAA AACGCCGCCG AAATCGGCAT GGAACACAAC CTCGGCCTGA CCTGCGACCC GATTGGCGGA CTGGTGCAAG TGCCGTGCAT CGAGCGCAAC GCCATGGGTT CGGTCAAGGC GATCAACGCC GTGCGCATGG CCATGCGCGG AGACGGGCAG CACTTCGTCT CCCTCGACAA GGTCATCCGC ACCATGCGCC AGACCGGCGC CGACATGAAA AGCAAATACA AGGAGACCGC CCGTGGCGGT CTGGCGGTCA ACATTATCGA GTGCTGA
|
Protein sequence | MSLSVFDLFK IGIGPSSSHT VGPMRAAARF VEGLRRENLL SATTSVRVEL YGSLGATGKG HGSDKAVLLG LEGEHPDTVD TETVAARLAE IRGNGRLILL GEHSIAFNEK EHLAMIRKPL AYHPNGMIFR AFDAAGLQIR SREYYSVGGG FVVDEDAAGA DRIVEDATPL TFPFKSAKDL LGHCATYGLS ISQVMLANES AWRPEAETRA GLLKIWQVMQ DCVAAGCRNE GILPGGLKVK RRAAALHRQL CKNPESSLRD PLSVLDWVNL YALAVNEENA NGGRVVTAPT NGAAGIIPAV LHYYMRFIPG ANDDGVVRFL LTAAAIGILY KENASISGAE VGCQGEVGVA CSMAAGALCE VLGGSVQQVE NAAEIGMEHN LGLTCDPIGG LVQVPCIERN AMGSVKAINA VRMAMRGDGQ HFVSLDKVIR TMRQTGADMK SKYKETARGG LAVNIIEC
|
| |