Gene Pfl01_4393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4393 
Symbol 
ID3712836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4954353 
End bp4955729 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content64% 
IMG OID 
ProductL-serine ammonia-lyase 
Protein accessionYP_350121 
Protein GI77460614 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.215998 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTAA GCGTGTTCGA CCTGTTCAAG ATTGGCATCG GCCCCTCCAG CTCCCACACC 
GTCGGCCCGA TGCGCGCAGC TGCGCGCTTC GTGGAAGGTC TGCGCCGGGA AAACCTGTTG
TCGGCCACCA CCAGCGTCAG GGTCGAGTTG TATGGATCCC TCGGCGCCAC GGGCAAGGGT
CACGGCAGCG ACAAGGCCGT GCTGCTGGGC CTGGAAGGTG AACACCCGGA CACCGTGGAT
ACTGAAACCG TCGCCGCCCG TCTCGCGGAG ATTCGTGGCA ACGGGCGTTT GATCCTGCTC
GGTGAACACA GCATTGCGTT CAACGAGAAA GAACACCTGG CAATGATCCG CAAGCCGTTG
GCCTATCACC CCAACGGCAT GATCTTCCGC GCCTTCGATG CGGCGGGATT GCAGATCCGC
AGCCGCGAGT ACTACTCGGT CGGCGGTGGG TTTGTGGTCG ACGAAGACGC GGCCGGCGCC
GACCGGATCG TCGAAGACGC CACCCCGCTG ACCTTCCCGT TCAAAAGTGC CAAGGACTTG
CTCGGTCATT GCGCCACCTA TGGTCTGTCG ATCAGTCAGG TGATGCTGGC CAACGAAAGC
GCCTGGCGCC CGGAGGCGGA AACCCGTGCC GGCCTGCTGA AAATCTGGCA AGTGATGCAG
GACTGTGTGG CCGCCGGCTG TCGCAACGAA GGCATTCTGC CGGGTGGCCT CAAGGTCAAG
CGGCGGGCGG CGGCGTTGCA CCGGCAACTG TGCAAGAACC CGGAATCGTC GCTGCGCGAT
CCGCTGTCGG TGCTGGACTG GGTCAACCTC TACGCCCTCG CTGTCAACGA AGAAAACGCC
AACGGCGGGC GCGTGGTCAC GGCACCGACC AACGGCGCGG CGGGGATCAT TCCTGCGGTG
CTGCATTACT ACATGCGCTT CATTCCCGGC GCGAACGATG ACGGCGTGGT GCGTTTCCTG
CTCACCGCCG CGGCCATCGG CATTCTGTAC AAGGAAAACG CCTCGATTTC CGGTGCCGAA
GTCGGCTGTC AGGGCGAGGT CGGCGTGGCC TGTTCGATGG CGGCCGGCGC GTTGTGCGAA
GTCCTCGGCG GCAGCGTGCA ACAAGTGGAA AACGCCGCCG AAATCGGCAT GGAACACAAC
CTCGGCCTGA CCTGCGACCC GATTGGCGGA CTGGTGCAAG TGCCGTGCAT CGAGCGCAAC
GCCATGGGTT CGGTCAAGGC GATCAACGCC GTGCGCATGG CCATGCGCGG AGACGGGCAG
CACTTCGTCT CCCTCGACAA GGTCATCCGC ACCATGCGCC AGACCGGCGC CGACATGAAA
AGCAAATACA AGGAGACCGC CCGTGGCGGT CTGGCGGTCA ACATTATCGA GTGCTGA
 
Protein sequence
MSLSVFDLFK IGIGPSSSHT VGPMRAAARF VEGLRRENLL SATTSVRVEL YGSLGATGKG 
HGSDKAVLLG LEGEHPDTVD TETVAARLAE IRGNGRLILL GEHSIAFNEK EHLAMIRKPL
AYHPNGMIFR AFDAAGLQIR SREYYSVGGG FVVDEDAAGA DRIVEDATPL TFPFKSAKDL
LGHCATYGLS ISQVMLANES AWRPEAETRA GLLKIWQVMQ DCVAAGCRNE GILPGGLKVK
RRAAALHRQL CKNPESSLRD PLSVLDWVNL YALAVNEENA NGGRVVTAPT NGAAGIIPAV
LHYYMRFIPG ANDDGVVRFL LTAAAIGILY KENASISGAE VGCQGEVGVA CSMAAGALCE
VLGGSVQQVE NAAEIGMEHN LGLTCDPIGG LVQVPCIERN AMGSVKAINA VRMAMRGDGQ
HFVSLDKVIR TMRQTGADMK SKYKETARGG LAVNIIEC