Gene Pfl01_4386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4386 
Symbol 
ID3712829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4945104 
End bp4946360 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content62% 
IMG OID 
Productarginine deiminase 
Protein accessionYP_350114 
Protein GI77460607 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.252294 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.182376 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGG AAAAAGCTAA GTACGGCGTC CATTCCGAAG CCGGCAAACT GCGCAAAGTC 
ATGGTTTGCT CCCCAGGTCT GGCCCATCAG CGGCTGACCC CGAACAACTG CGATGAACTG
CTGTTCGACG ACGTGCTGTG GGTCGCTCAG GCCAAGCGCG ACCACTTCGA CTTCGTGACC
AAGATGCGTG AGCGCGGAAT CGACGTGCTG GAAATGCACA ACCTGCTGAC CGACATCGTC
GGCAACCCCG AAGCGCTGGA CTGGATCCTC GAGCGCAAGG TCACCGCCGA CTCGGTGGGC
CTGGGCCTGA TCAACGAAGT CAAATCCTGG CTGAAAAGCC TGGAGCCGCG ACACATCGCC
GAATTCCTGA TTGGCGGCGT GTCCGCCGAT GACCTGCCGG ACAGCTTCGG TGGCAAGACC
ATCCAGATGT TCCGCGACTT CCTCGGCCAC TCCAGTTTCA TTCTGCCGCC GCTGCCGAAC
ACCCAGTTCA CCCGCGACAC CACCTGCTGG ATCTACGGTG GCGTGACGCT GAACCCGATG
TACTGGCCGG CGCGTCGTCA GGAGACCTTG CTGACCACCG CCATCTACAA ATTCCATCCG
CAGTTCACCA ACGCCGATTT CGAGATCTGG TACGGCGACC CGGACAAGGA TCACGGCAGC
TCGACCCTCG AAGGCGGCGA CGTCATGCCA ATCGGCAACG GCGTGGTGCT GATCGGTATG
GGCGAGCGCT CGTCGCGTCA GGCCATCGGC CAACTGGCGC TGAACCTGTT CAAGAACAAG
GCCGTGGAAA AAGTCATCGT CGCCGGCCTG CCGAAGTCTC GCGCCGCGAT GCACCTCGAT
ACCGTGTTCA GCTTCTGCGA CCGCGACCTC GTCACGATCT TCCCGGAAGT GGTCAACCAG
ATCGTCGCCT TCACCCTGCG CCCTGACGAA AGCAAACAGG GCGGCATCGA CATCCGTCGC
GAAGAAGGCA CGTTCCTCGA CGTCGTGGCC AAAGCCCTCA ACCTGCCGAA ACTGCGCGTC
GTCGAAACCG GCGGCAACAG CTTCGCCGCC GAACGCGAGC AATGGGACGA CGGCAACAAC
GTGGTGGCCG TGGAGCCGGG CGTGGTCATC GGCTACGACC GCAACACTTA CACCAACACC
CTGCTGCGCA AGGCCGGGGT CGAGGTCATC ACCATCAGCG CCGGCGAACT CGGTCGCGGC
CGTGGCGGCG GCCACTGCAT GACTTGCCCG ATCATCCGCG ACCCTATCGA TTACTAA
 
Protein sequence
MTTEKAKYGV HSEAGKLRKV MVCSPGLAHQ RLTPNNCDEL LFDDVLWVAQ AKRDHFDFVT 
KMRERGIDVL EMHNLLTDIV GNPEALDWIL ERKVTADSVG LGLINEVKSW LKSLEPRHIA
EFLIGGVSAD DLPDSFGGKT IQMFRDFLGH SSFILPPLPN TQFTRDTTCW IYGGVTLNPM
YWPARRQETL LTTAIYKFHP QFTNADFEIW YGDPDKDHGS STLEGGDVMP IGNGVVLIGM
GERSSRQAIG QLALNLFKNK AVEKVIVAGL PKSRAAMHLD TVFSFCDRDL VTIFPEVVNQ
IVAFTLRPDE SKQGGIDIRR EEGTFLDVVA KALNLPKLRV VETGGNSFAA EREQWDDGNN
VVAVEPGVVI GYDRNTYTNT LLRKAGVEVI TISAGELGRG RGGGHCMTCP IIRDPIDY