Gene Pfl01_4382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4382 
Symbol 
ID3712825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4938090 
End bp4940306 
Gene Length2217 bp 
Protein Length738 aa 
Translation table11 
GC content62% 
IMG OID 
Productchemotaxis sensory transducer 
Protein accessionYP_350110 
Protein GI77460603 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.218372 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTGA ATGGATTTGG CGAACCGGGC ACCTTCCTGC CTCTTAGCCA ACAGCTCATC 
CATTCGCGAG AACGTCCCAT GTTCGACTCT CTGTCCATTC GCCTGAAAAT CGTCCTGCTG
TCCGGCCTGT GCCTGCTCGG TGTGGTCGCG CTGATCGTTG GCATCAATAT TTACCAGACC
AACCAGAACG ACGAACTGGT CAGCACTTCC AGCAGCAAGA TGCTCACCGC CAGTGTGCAG
GACCTGCTGC AGGCCAAGGC TGCCGAACAG GCGGTGCAAG TGCAGAAAAC CTTCGGCGAG
AGCCTGCTGG TGATCACCGC CCTGGCCGAC CAGGTCAAGG ACATGCGCGT CATGGCTGCC
AAGCGTTCGC TGGACGCCGG CGCCCTGCGT GAAGAGTTGA ACCAGAGCCT GAAAACCGCC
TTCGAACGCA ACAGCAAGGT GCTCGGCATC TGGCTGGCGT TCGAACCGAA CGGACTGGAT
GGCAAGGACA GCGAATTCGC CAACGATGCC GCGCGTCAGT CCAACGAGGC GGGGCGTTTC
GCCAGTTACT GGAGCCGTGC TGCGGGTCCG TCGCTGAACA CGATCATGGT CGAAGACGAC
ATGAACAAGA CCACCCTCAG CGTCAGCGGC ACGCCTTACA ACAGCTGGTA CACCTGCCCT
CGCGACAACA AGCGCACCTG CCTGCTTGAT CCTTACGCCG ATACCGTGGG CGGCAAGGAA
ATGCTCATGA CCACCATTTC CGTACCGTTG CTGGTGGACG GCAAGGCCAT CGGCGTGGTC
GGCATCGACA TTGCCCTGGA TGCGCTGCAA GCGGCGGCCG TCAATTCCCA GCGTGAGCTG
TTCAACAGTG CCGGACACAT GCTGATCGTC TCCGGCAGCG GCGTGCTGGG CGCCTACAGC
ACCGACGCAA CCAAAGTCGG CAAAGGCATC ACCGAAACCC TCGGTGCCGA AGGCAAGGAC
ATCCTGCAAC TGCTGAGCGC CGGCACGCCG AAGATTCTCG AACAGGGCGA CCTGATCCGC
GCCGTGTACC CGGTCGATCC GATTGGCAAC TCCCGGGCCT GGGGCGTGGT CATCGACCTG
CCGAAACAAG TGCTGCTGGC CGACTCGGTC AAGCTCCAGG CAGTGCTCGA CGATGCCCAG
CAAACCGGCA TGATTACCGC GTTGGCGGTG GCCGTGATCG CCGGCCTGAT CGGTCTGCTG
CTGATCTGGC TCACCGCCTC CGGCGTGACC CGCCCGATCA ACAGCGTCGC CGAAATGCTG
AAGAACATCG CCAGCGGCGA AGGCGACCTG ACCCAGCGCC TGAACTACAC CAAGAAAGAC
GAACTGGGCG AACTGGTGAA CTGGTTCAAC CGCTTCCTCG ACAAGCTGCA ACCGACCATC
GCCCAGATCA AACAGAGCAT CACCGAGGCC CGTGGCACCG CCGATCAATC GTCGGAAATC
GCCCGCCAGA CCAGCGAAGG CATGCAGGTG CAGTTCCGCG AGATCGATCA GGTGGCAACC
GCCTCCAACG AGATGAGCGC CACCGCCCAC GACGTGGCCA ACAGCGCCTC GAATGCGGCC
AACGCGGCGA AAGGCGCCGA CCAGTCGGCC AAGGACGGCA TGTCGATCAT CGAGCGCAGC
ACCCGCGACA TCAATCAACT GGCGGACGAA GTCAGCAAAG CGGTGACCGA AGTCGAAGAG
CTGGCAGTCA ACAGCGAGCA GATCGGTTCG GTGCTGGAAG TGATCCGCAG CATCGCTGAA
CAGACCAACC TGCTGGCACT GAACGCCGCG ATCGAAGCGG CCCGTGCCGG TGAAAGCGGT
CGTGGTTTTG CGGTGGTGGC CGACGAAGTC CGTAACCTCG CCAAGCGCAC TCAGGATTCG
GTGGAAGAAA TCCGCGTGGT CATCGAACGC ATCCAGACCG GCACCCGTGG CGTGGTCGCG
ACCATGCACT CGAGCCAGAC CCAGGCTCAC AACAACGCCG GGCAGATCCG CCAGGCCGTG
GACGCCCTCG GCAAGATCAG CGACGCGGTC ACCGTGATCA GCGACATGAA CCTGCAGATC
GCCAGCGCCG CCGAACAGCA GAGCGCGGTG GCCGAAGAGG TCAACCGCAA CGTCTCGGCG
ATCCGCACCG TCACCGAAAC CCTGACCGAA CAGGCCACCG AATCGGCGGC GATCAGCAGC
CAGCTCAACG CCCTGGCCAG CCAGCAGATG AAATTGATGG ATCAGTTCCG CGTCTGA
 
Protein sequence
MALNGFGEPG TFLPLSQQLI HSRERPMFDS LSIRLKIVLL SGLCLLGVVA LIVGINIYQT 
NQNDELVSTS SSKMLTASVQ DLLQAKAAEQ AVQVQKTFGE SLLVITALAD QVKDMRVMAA
KRSLDAGALR EELNQSLKTA FERNSKVLGI WLAFEPNGLD GKDSEFANDA ARQSNEAGRF
ASYWSRAAGP SLNTIMVEDD MNKTTLSVSG TPYNSWYTCP RDNKRTCLLD PYADTVGGKE
MLMTTISVPL LVDGKAIGVV GIDIALDALQ AAAVNSQREL FNSAGHMLIV SGSGVLGAYS
TDATKVGKGI TETLGAEGKD ILQLLSAGTP KILEQGDLIR AVYPVDPIGN SRAWGVVIDL
PKQVLLADSV KLQAVLDDAQ QTGMITALAV AVIAGLIGLL LIWLTASGVT RPINSVAEML
KNIASGEGDL TQRLNYTKKD ELGELVNWFN RFLDKLQPTI AQIKQSITEA RGTADQSSEI
ARQTSEGMQV QFREIDQVAT ASNEMSATAH DVANSASNAA NAAKGADQSA KDGMSIIERS
TRDINQLADE VSKAVTEVEE LAVNSEQIGS VLEVIRSIAE QTNLLALNAA IEAARAGESG
RGFAVVADEV RNLAKRTQDS VEEIRVVIER IQTGTRGVVA TMHSSQTQAH NNAGQIRQAV
DALGKISDAV TVISDMNLQI ASAAEQQSAV AEEVNRNVSA IRTVTETLTE QATESAAISS
QLNALASQQM KLMDQFRV