Gene Pfl01_4308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4308 
Symbol 
ID3714124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4865350 
End bp4866669 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content59% 
IMG OID 
Productchemotaxis sensory transducer, Pas/Pac sensor 
Protein accessionYP_350036 
Protein GI77460529 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.458128 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTCA ATCGTCACAA GACCGTCCTC GTCGATCTTC AAAACACCAT CAACCAACAA 
GCCGGCCTGT TGGAAGCGAT CAACCGCTCC ATGGCAGTGA TCGAATTCGA TGTCGACGGT
ATCGTTCTGC GCGCCAACGA CAACTTCCTG AAAACCATGG GTTACACCCG CGAACAGGTA
GTCGGGCAAC CCCATCGTCA TTTCTGTTCT CCAGAGTTTG CCCGTGGCAA TCAGTACACC
GAGTTGTGGT CGCGATTGAA AAGCGGCCAG TTCCAGTCCG GCACCTTTGA ACGCATCGAC
AGTCAGGGCC GACCGATCTG GCTCGAAGCC AGCTATAACC CGATCAAGGA TGACTCGGGC
CGCGTGGTGA AAGTGGTCAA GTACGCCATG GATGTCACCG CCAAAGTGCA GCAGGAAAGC
GAAGCCAATG CGAAATTGCA GGCGATCGAC CGCGCCATGG CGGTGATCGA ATTCGATCTC
GACGGCAATA TTCTCACCGC CAATCAGAAT TTCCTGACGC GCATGGGTTA CACCCTTGCC
GAACTCAAAG GCAAACATCA CCGCTTGTTC TGCCCCGCGC AACTGGTCAA CAGCAGCGCC
TACCAGGATT TCTGGCGCCG GTTGAATCAG GGCGAACTGT TTCAGGGCCA GTTCGAACGC
GTCGACAAAC GTGGTCAGAC CGTATGGCTG GAAGCCAATT ACAACCCGGT CTACGACGCC
GCCGGCCGCT TGTGCAAAGT GGTGAAGTTC GCGTCGGACG TGACCGCCCG GGTCGAACAG
CACGAGCAGG ATGCGCGCAG TGCCAGCGCG GCCTATCACA TCTCGGTGGC CACCCGAAAA
GTCGCCGAGC AAGGTACGCA AGTGATTCAG CAAGCCGCCA GTGAAATGCG CGAGATTGCC
GACGACATTG CCGAATCCTC AACCCTCATC GCGCAGCTCG GCGAACGCTC CGAGCAGATC
ACTGCCATCG TCAACACCAT CCGCGCGATT GCCGATCAGA CCAATCTTTT GGCCCTGAAC
GCTGCAATCG AAGCCGCCCG AGCCGGTGAG CAGGGTCGCG GTTTTGCCGT GGTGGCCGAT
GAAGTGCGGC AGCTGGCAGC GCGCACCAGC GGCTCCACTG CGGAAATTTC CAACATGATC
AGCCTGATCC AGACCGAAAC CCGTCAGGCG ATCAAGAGCA TGGACGGCAC CCGAGGGCGT
GCGGCGCAAG GTGTGGAGCT GGCGGATCAG GCCGGTACGG TGATTCTGCA GATTCGGGAC
GGCGCCAGCG AGGCGGTGGA AGCGGTGAGC ATGTTTGCCA ACGAGCGTGC GCCGGGATAA
 
Protein sequence
MIFNRHKTVL VDLQNTINQQ AGLLEAINRS MAVIEFDVDG IVLRANDNFL KTMGYTREQV 
VGQPHRHFCS PEFARGNQYT ELWSRLKSGQ FQSGTFERID SQGRPIWLEA SYNPIKDDSG
RVVKVVKYAM DVTAKVQQES EANAKLQAID RAMAVIEFDL DGNILTANQN FLTRMGYTLA
ELKGKHHRLF CPAQLVNSSA YQDFWRRLNQ GELFQGQFER VDKRGQTVWL EANYNPVYDA
AGRLCKVVKF ASDVTARVEQ HEQDARSASA AYHISVATRK VAEQGTQVIQ QAASEMREIA
DDIAESSTLI AQLGERSEQI TAIVNTIRAI ADQTNLLALN AAIEAARAGE QGRGFAVVAD
EVRQLAARTS GSTAEISNMI SLIQTETRQA IKSMDGTRGR AAQGVELADQ AGTVILQIRD
GASEAVEAVS MFANERAPG