Gene Pfl01_4271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4271 
Symbol 
ID3717863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4818240 
End bp4819682 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content60% 
IMG OID 
Productdivalent cation transporter 
Protein accessionYP_349999 
Protein GI77460492 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000733148 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAA TCGAAGTAAA GAAAACACAG GAAAGCCTGC AGGATCGCTT GGCTCAGGTC 
GTCGAGCTGC TGCAGCGCCA GCGGGTCGTC GAAGACCTGA CTCATCGCCA GGAAGGCCCG
CATCATGACC GGGTCGAGAA CCTGGTCCAC CGGCAAAACC TCGTCGAGCT GCAACGCAAG
CTCGATGATC TGCACTCCGC CGACGTCGCC TACATTCTTG AAGCCCTGCC GCTGGACGAT
CGTCTGACGC TCTGGCAGCT GGTCAAGGCC GATCGCGACG GCGACATTCT TCTCGAAGTA
TCCGATTCCG TCCGTGAAAC GCTGATCGCC GACATGGACG ATCATGAGCT CCTGGCTGCG
GCCAAGGACA TGGATGCCGA CGAACTTGCT GACCTGGCCT CCGAGCTGCC GCGAGACGTC
GTCCATGAGC TGATGGAGAC TCTGGATCAG CAGCAACGTG AGCGTGTGCG TTCGGCTCTC
TCCTACGATG AGGAGCAGGT CGGTGCGCTG ATGGACTTCG AGATGGTGAC CATCCGTGAG
GACGTCAGTC TTGAAGTGGT TCTGCGTTAC CTGCGCCGCC TGAAAGAGCT GCCGGGTCAT
ACCGACAAAC TGTTCGTCGT CGACTACGAC GGCGTGCTCA AGGGCGTGCT GCCAATCAAG
CGTTTGCTGG TCAATGATCC GGAAAAACAG GTTTCCGAAG TCATGGCCAG TGATCCGGTG
AGTTTTCATC CGGATGAAGA TGCCTACGAC GCCGCTCAGG CGTTCGAACG TTACGACTTG
ATCTCGGCCC CGGTGGTCGA CAAGAACGGC AAGCTGATCG GCCGTCTGAC CATCGACGAA
ATGGTCGACC TGATTCGTGA GGAGAGCGAA AGCGAAGTCC TCAACATGGC GGGTCTGCGC
GAAGAAGAAG ACATTTTCGC TTCGGTCTGG AAGTCCCTGC GCAACCGTTG GGCGTGGCTG
GCGATCAACC TGATCACAGC ATTCGTCGCT TCGCGGGTGA TCGGTCTGTT CGAAGGTTCA
ATCGAGAAGC TGGTGGCTCT GGCGGCGCTG ATGCCGATCG TTGCGGGCAT TGGCGGCAAC
TCGGGCAACC AGACGATCAC CATGATCGTT CGCGCCATGG CGCTCGACCA GGTCAGCACC
GGCAACACCT CGCGCCTGAT GCGCAAGGAA CTGGCCGTGG CGTTGATCAA CGGCCTGGTC
TGGGGCGGTG TGATCGGTGT GGTGGCTTAC ATGCTCTACG GTAGTTGGTC GCTGGGCGTG
GTGATGACGG CCGCCATGAC GCTCAATCTG CTGCTGGCAG CGTTGATGGG GGTGTTGATC
CCGATGACGC TGGCCAAGAT GGGTCGCGAT CCGGCGATGG GCGCCAGTGT GATGATCACG
GCCATGACCG ACAGTGGTGG CTTCTTCATC TTCCTGGGGC TGGCGACGAT TTTCCTGCTC
TGA
 
Protein sequence
MSEIEVKKTQ ESLQDRLAQV VELLQRQRVV EDLTHRQEGP HHDRVENLVH RQNLVELQRK 
LDDLHSADVA YILEALPLDD RLTLWQLVKA DRDGDILLEV SDSVRETLIA DMDDHELLAA
AKDMDADELA DLASELPRDV VHELMETLDQ QQRERVRSAL SYDEEQVGAL MDFEMVTIRE
DVSLEVVLRY LRRLKELPGH TDKLFVVDYD GVLKGVLPIK RLLVNDPEKQ VSEVMASDPV
SFHPDEDAYD AAQAFERYDL ISAPVVDKNG KLIGRLTIDE MVDLIREESE SEVLNMAGLR
EEEDIFASVW KSLRNRWAWL AINLITAFVA SRVIGLFEGS IEKLVALAAL MPIVAGIGGN
SGNQTITMIV RAMALDQVST GNTSRLMRKE LAVALINGLV WGGVIGVVAY MLYGSWSLGV
VMTAAMTLNL LLAALMGVLI PMTLAKMGRD PAMGASVMIT AMTDSGGFFI FLGLATIFLL