Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4258 |
Symbol | |
ID | 3717849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4803567 |
End bp | 4804925 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | major facilitator transporter |
Protein accession | YP_349986 |
Protein GI | 77460479 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.894959 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCAAA TCTGGAAATC CTTTCGAGCG CTGTATTTCG CCTCGCTGAT GATGTTGATC GGCTCGGGCC TTCTTTCTAC TTATCTGGCT TTGCGTCTGG CTGCCGACCA TGTCGACGGG TTGTGGGTCG GTGCGTTGAT GGCCGCCAAC TATTTCGGTC TGGTGCTGGG CGGCAAGATT GGTCACCGCT TGATTGCCCG GGTCGGGCAT ATCCGCGCCT ACTCGGCGTG TGCCGGGATC GTCGGCGCGG CGGTGCTCGG TCACGGGCTG GTGGACTGGT TGCCGGCGTG GCTGGTGCTG CGGACCATCG TCGGTCTCGG CATGATGTGC CAATACATGG TGATCGAGAG CTGGCTGAAC GAGCAGGCCG ACGCCAATCA GCGCGGTCTG GTGTTCAGTG GCTACATGAT CGCGTCGTAC CTGGGGCTGG TGCTCGGTCA GCTGATTCTG GTCATGCACC CGGGCCTTGG CCTGGAACTG CTGATGCTGG TCGCGCTGTG TTTTGCCCTG TGTCTGGTGC CGGTGGCGCT GACCCGTCGG ATTCACCCGG CACCGCTGCA TCCGGCGCCG ATGGAGCCGC GCTTCTTTAT CAAGCGTGTG CCGCAGTCGC TGAGCACGGT GCTCGGGGCC GGGCTGATCA TCGGTTCGTT CTATGGTCTG GCGCCGCTGT ATGCCTCCCA GCAGGGGCTG TCCACCGAGC AGGTCGGTCT GTTCATGGGT AGCTGCATTT TTGCCGGGCT GGTGGTGCAG TGGCCGCTGG GCTGGTTGTC CGACCGCTAT GACCGGGCGC TGTTGATCCG CTGTTTCGCG CTGTTCCTCG CGGTTGCTTC GTTGCCACTG GCGATCCTGC CGCAAGTGCC GCTGGAGGTG CTGTTCGTGG TCGGCTTCCT CTGTTCGCTG GTGCAGTTCT GCCTGTACCC GTTGGCGGTG GCGTTCTCCA ACGACCACGT CGAAGGCGAA CGTCGGGTGT CGCTGACGGC GATGCTGCTG GTGACCTACG GCGTGGGCGC CAGTATCGGG CCGCTGGTGG CCGGGGTGCT GATGAAGCTG TTCGGGCCGC AGAGCCTGTA CGCGTTCTTC ACCTTTTTCG CGCTGGTGCT GGTGTGGCGG ATCCGGCCGA AAGCCGTGAC CAATCTGCAC CAGGTCGACG ATGCACCGCT GCATCACGTG GCGATGCCGG ACAGCATGTC CAGCTCGCCG CTGGTGGCTG CGCTTGATCC GCGGGTGGAT GAACAAGTGG TGCAGGAGCA GATGCAGAAT ACGGTCGCTC CGGAGCCTGA ACCCGAGCCA GAACCTGTCG CGCCAACCGA CTCGACAATC GAAGGCGAAG GGCCGGACAT CAGCCCCGCC AGACCGTGA
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Protein sequence | MRQIWKSFRA LYFASLMMLI GSGLLSTYLA LRLAADHVDG LWVGALMAAN YFGLVLGGKI GHRLIARVGH IRAYSACAGI VGAAVLGHGL VDWLPAWLVL RTIVGLGMMC QYMVIESWLN EQADANQRGL VFSGYMIASY LGLVLGQLIL VMHPGLGLEL LMLVALCFAL CLVPVALTRR IHPAPLHPAP MEPRFFIKRV PQSLSTVLGA GLIIGSFYGL APLYASQQGL STEQVGLFMG SCIFAGLVVQ WPLGWLSDRY DRALLIRCFA LFLAVASLPL AILPQVPLEV LFVVGFLCSL VQFCLYPLAV AFSNDHVEGE RRVSLTAMLL VTYGVGASIG PLVAGVLMKL FGPQSLYAFF TFFALVLVWR IRPKAVTNLH QVDDAPLHHV AMPDSMSSSP LVAALDPRVD EQVVQEQMQN TVAPEPEPEP EPVAPTDSTI EGEGPDISPA RP
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