Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4220 |
Symbol | |
ID | 3717720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4763196 |
End bp | 4764614 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | periplasmic sensor Signal transduction histidine kinase |
Protein accession | YP_349948 |
Protein GI | 77460441 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.345357 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.151496 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCTGACC TGCCGGGCCG GCACTCGCTG TTCTGGAAGC TCGCCTGTCT GCTGGTGGCG TTCTGTCTGC TGATGATCTG GCTGAGCTGG TCCTGGGGCT GGTACATGGA GCAGCGCAAT CAGTTCCTCT CCGACGACGC CCGTCGCACC CTGAGCCGTT ATGCCGCCGA GGCGGAGCGC GCCTGGCAGC AGGGCGAGCG CGATGGCATC GATAGCTGGT TGCAAAGCAT GGAGCTGCGC GAGGCCGGCT GGGTCGGCGT GATCGGCGGC AACCTGCAGT CGCTGGGCAG CCAACCGTTC AACGCTCAAG AGCTTCAGCA CCTGACCTTC CTGCGAGGTC TGGACTGGCC GATTCATAAA AGGGGCCGAC CGTGGCTGCG GGTTCCGTTC CCCACTGACC CGACTGCCGG CAGTCTGGTC ATCGAGTTGC CCGAGCGATT CCTGCCGGGG AAATACCGGG TGTTCTGGCG GGTCATCACC AACGGTGTGA TTCCCGGCCT GTTCACCCTG CTGCTGTGCG TCGGCCTGTA TCGCCTGCTG GTGGTGCCGC TTAACAATCT GCGCGAGCAG GCCAACGCCT GGCGCGCCGA TGAACTGAAT GTGCGGTTGT CGAGCGGCAT CACCCAGCGC CCCGATGAAC TCGGCGAACT GGCCCGCGCC TTCGATTCGA TGTCCGAACG CCTGCAGTCC ACCGTGGCCT TGCAACAGCA ACTGCTGCGC GACCTGTCCC ACGAACTGCG CACGCCCCTG AGCCGGTTGC GGGTCGCCAG TGAAAGCGAG CAACAGCTGC AACCGTTGCG CGAGCGCATC GGTCGCGAAG TCGACGTGAT GCAGCGACTA GTGGAGGACA CCCTGCAACT GGCCTGGCTC GACACCGAAC GCGCACCGTT GCCGGACGAA GCGATCCAGA TTCAGGCGCT GTGGGAAATG CTCACGGAAA ACGCCTGCTA CGAAAGCTGC TGTCCGGTGG GGCAGTTGCA GTGCGGTGTT GAAGCTTCCT GCTGGGTACG CGGCAATCTC AACACCCTGG CCCAGGCTCT GGAAAACATC CTGCGCAATG CGATTCGTCA TTCGCCACCG GGCGGCATCG TGCGGCTCGA CGGTCGACGA GAGGGCGATT ACTGGCACCT GTGGCTGGAG GACGAGGGCG GTGGTGTGGC CGACGCGGAT CTTGAGCGGA TCTTTTCGCC CTTCATCCGC CTCGACGGCT CGCGGCCGGG GGATGATGGA TTCGGTCTGG GCCTGAGCAT CGCGAGGAAC GCGGTGCAAC GCCAGGGCGG TACTTTGTGG GCTGAGAATG GCCCGTCGGG ATTGCGACTG AATCTGCGCT TGGTGGCGGA GGACAGTGCT GTCATTCCTG AAGTCTTCGC TGGCAAGCCA GATCCCACAG TGGACATGGG CCGCCCGCAG ATTGTGTGA
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Protein sequence | MSDLPGRHSL FWKLACLLVA FCLLMIWLSW SWGWYMEQRN QFLSDDARRT LSRYAAEAER AWQQGERDGI DSWLQSMELR EAGWVGVIGG NLQSLGSQPF NAQELQHLTF LRGLDWPIHK RGRPWLRVPF PTDPTAGSLV IELPERFLPG KYRVFWRVIT NGVIPGLFTL LLCVGLYRLL VVPLNNLREQ ANAWRADELN VRLSSGITQR PDELGELARA FDSMSERLQS TVALQQQLLR DLSHELRTPL SRLRVASESE QQLQPLRERI GREVDVMQRL VEDTLQLAWL DTERAPLPDE AIQIQALWEM LTENACYESC CPVGQLQCGV EASCWVRGNL NTLAQALENI LRNAIRHSPP GGIVRLDGRR EGDYWHLWLE DEGGGVADAD LERIFSPFIR LDGSRPGDDG FGLGLSIARN AVQRQGGTLW AENGPSGLRL NLRLVAEDSA VIPEVFAGKP DPTVDMGRPQ IV
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