Gene Pfl01_4197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4197 
Symbol 
ID3717617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4738035 
End bp4738763 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content64% 
IMG OID 
Producttwo component transcriptional regulator 
Protein accessionYP_349925 
Protein GI77460418 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.865203 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGACG AGCAGAAAGA CGACAAGCGC TGGAGCATCC GTGCCCTGAT CGTCGACGAT 
GACGTGCCGA TCCGCGAACT GATGATCGAC TACCTGGCCC GCTTCAACAT TCACGCCAGC
GGCGTCACCG ACGGCGCGGC GATGCGCCAG GCGATGCAGG CCGAACATTT CGACGTGGTG
GTGCTCGACC TGATGCTGCC CGGCGAGGAC GGTCTGTCGC TGTGCCGCTG GCTACGCGCC
GAATCGGACA TCCCGATCCT GATGCTCACC GCCCGTTGCG AACCCACCGA CCGGATCATC
GGCCTGGAAC TGGGCGCCGA TGACTACATG GCCAAACCGT TCGAACCACG GGAACTGGTG
GCGCGGATCC AGACGATTCT GCGTCGGGTG CGCGACGACC GCAGCGAACA GCGTGCGAAC
ATTCGCTTCG ACAACTGGCG CCTGAACAGC GTCCTGCGCC AGCTCATCGC TGACGATGGC
CTGGTGGTGC CGCTGTCCAA TGCCGAATTC CGCCTGCTCT GGGTGTTCAT CGAACGTCCG
CGCCGGGTGC TCAGCCGCGA ACAGTTGCTG GACGCCGCCC GTGGCCGCTC GATCGAAGCC
TTCGACCGCA GCATCGACTT GCTGGTCTCG CGTCTGCGGC AAAAACTCGG CGACGACCCG
AAAGCCCCGC AACTGATCAA GACCGTACGT GGTGAAGGCT ACCTGTTCGA CGCCCGGGAC
ATTGGCTGA
 
Protein sequence
MNDEQKDDKR WSIRALIVDD DVPIRELMID YLARFNIHAS GVTDGAAMRQ AMQAEHFDVV 
VLDLMLPGED GLSLCRWLRA ESDIPILMLT ARCEPTDRII GLELGADDYM AKPFEPRELV
ARIQTILRRV RDDRSEQRAN IRFDNWRLNS VLRQLIADDG LVVPLSNAEF RLLWVFIERP
RRVLSREQLL DAARGRSIEA FDRSIDLLVS RLRQKLGDDP KAPQLIKTVR GEGYLFDARD
IG