Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4197 |
Symbol | |
ID | 3717617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4738035 |
End bp | 4738763 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | two component transcriptional regulator |
Protein accession | YP_349925 |
Protein GI | 77460418 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.865203 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACGACG AGCAGAAAGA CGACAAGCGC TGGAGCATCC GTGCCCTGAT CGTCGACGAT GACGTGCCGA TCCGCGAACT GATGATCGAC TACCTGGCCC GCTTCAACAT TCACGCCAGC GGCGTCACCG ACGGCGCGGC GATGCGCCAG GCGATGCAGG CCGAACATTT CGACGTGGTG GTGCTCGACC TGATGCTGCC CGGCGAGGAC GGTCTGTCGC TGTGCCGCTG GCTACGCGCC GAATCGGACA TCCCGATCCT GATGCTCACC GCCCGTTGCG AACCCACCGA CCGGATCATC GGCCTGGAAC TGGGCGCCGA TGACTACATG GCCAAACCGT TCGAACCACG GGAACTGGTG GCGCGGATCC AGACGATTCT GCGTCGGGTG CGCGACGACC GCAGCGAACA GCGTGCGAAC ATTCGCTTCG ACAACTGGCG CCTGAACAGC GTCCTGCGCC AGCTCATCGC TGACGATGGC CTGGTGGTGC CGCTGTCCAA TGCCGAATTC CGCCTGCTCT GGGTGTTCAT CGAACGTCCG CGCCGGGTGC TCAGCCGCGA ACAGTTGCTG GACGCCGCCC GTGGCCGCTC GATCGAAGCC TTCGACCGCA GCATCGACTT GCTGGTCTCG CGTCTGCGGC AAAAACTCGG CGACGACCCG AAAGCCCCGC AACTGATCAA GACCGTACGT GGTGAAGGCT ACCTGTTCGA CGCCCGGGAC ATTGGCTGA
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Protein sequence | MNDEQKDDKR WSIRALIVDD DVPIRELMID YLARFNIHAS GVTDGAAMRQ AMQAEHFDVV VLDLMLPGED GLSLCRWLRA ESDIPILMLT ARCEPTDRII GLELGADDYM AKPFEPRELV ARIQTILRRV RDDRSEQRAN IRFDNWRLNS VLRQLIADDG LVVPLSNAEF RLLWVFIERP RRVLSREQLL DAARGRSIEA FDRSIDLLVS RLRQKLGDDP KAPQLIKTVR GEGYLFDARD IG
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