Gene Pfl01_4194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4194 
Symbol 
ID3717595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4734973 
End bp4735734 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content62% 
IMG OID 
Productshort chain dehydrogenase 
Protein accessionYP_349922 
Protein GI77460415 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.896625 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGA CGTTTTCCGG TCAGGTAGCC GTCGTCACCG GCGCGGCCAA CGGCATCGGC 
CGCGCGACGG CCCAGGCGTT CGCCGCCGAA GGTCTGAAAG TGGTGGTGGC CGATCTGGAT
GCGGCCGGGG GCGAGGGCAC CGTGGCGCTG ATTCGTACAG CCGGCGGCGA AGCGACCTTC
GTGCGCTGCA ACGTGACCGT CGAAAGCGAA GTGAAGAATC TGATGGACGA GGTGATCAAT
ACCTACGGCC GTCTCGACTA TGCCTTCAAC AATGCCGGGA TCGAAATCGA GAAGGGCAAA
CTGGCCGAAG GCTCGATGGA TGAGTTCGAC GCGATCATGG GCGTCAACGT CAAGGGCGTG
TGGCTGTGCA TGAAGTACCA GCTGCCGTTG CTGCTGGCTC AGGGCGGCGG GGCGATCGTC
AACACTGCAT CGGTGGCTGG ATTGGGCGCT GCGCCGAAGA TGAGCATCTA TGCCGCCTCC
AAGCACGCGG TAATCGGTCT GACCAAGTCC GCCGCCATCG AATACGCCAA GAAGAAAATC
CGCGTCAACG CCGTATGCCC GGCGGTGATC GATACCGACA TGTTCCGTCG CGCCTATGAA
GCGGATCCGA AGAAAGGCGA ATTTGCCAAC GCGATGCACC CGGTCGGCCG TATCGGCAAG
GTCGAGGAAA TTGCCAGCGC CGTGCTGTAC CTGTGCAGTG ATGGTGCGGC GTTTACCACC
GGCCATTCGC TGGCGGTGGA TGGTGGCGTG ACTGCCTTCT AA
 
Protein sequence
MSMTFSGQVA VVTGAANGIG RATAQAFAAE GLKVVVADLD AAGGEGTVAL IRTAGGEATF 
VRCNVTVESE VKNLMDEVIN TYGRLDYAFN NAGIEIEKGK LAEGSMDEFD AIMGVNVKGV
WLCMKYQLPL LLAQGGGAIV NTASVAGLGA APKMSIYAAS KHAVIGLTKS AAIEYAKKKI
RVNAVCPAVI DTDMFRRAYE ADPKKGEFAN AMHPVGRIGK VEEIASAVLY LCSDGAAFTT
GHSLAVDGGV TAF