Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4193 |
Symbol | |
ID | 3717594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4733378 |
End bp | 4734778 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | GntR family transcriptional regulator |
Protein accession | YP_349921 |
Protein GI | 77460414 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATTGA GAATTGACCG ACAGGCGATG GTGCCGGTTG TACAGCAGAT TGTTGACGGG TTGACCGAGT GGATCGTGCA GGAACAGGTG CCGCCGACGA CGCGGCTGCC CTCCGTACGA CAGATCGCTC GACGCAATCT GCTCAGCCAG TCCTGCGTCA TGGAGGCTTG CGAGCGTCTG GTGGCGCAGG GAATTCTGGC GTCGCGCCAG GGCTCGGGAT TCATGGTGGC GGCGTTGTTG CCGGATTATT GCCGGGGGAG TAATGGCTCC GAGGCAGGCG ACGAGCAGCA CGGTCGCGTT ACGCAATCGC CCTGGCGCGG CGGATTGAAG CTGGGCGCTG GTGTCCTGCC GGAGAGTTGG CGTGAGCCGG ATGATCTGAG TTATGCGATC CGACAGGTGG CGCGCGCCGA TATGGCCAGC CTGTTCAACT ACAACGACCC CCTCGGTCTT CCGGCGTTGC GGGAGCAGAT TGCCAAGCGT CTCGGATTGC TGGATATCAA GGCCCTCGAT GAACAGGTGC TGACGACTGC CGGTGCCAGC CACGCTCTGG ACCTGATCAT GCGGACCCTG TTCAAGGCCG GCGATTGCGT GGTGGTCGAA ACGCCCGGAC ATGCGCCGCT GTTCGAACTT TTGCGCTTGC ACGGCATTCG CATGCTGGAG GTGCGCCGCA CTCCGAGCGG TCCGGACATC GAAGCGCTCG AGGCGTTACT GCAACAGTTC AGGCCGACAG CGCTGTTCAT CAACAGTCAT CACCACAATC CCACGGGCAG TTGCCTGGCG CCGGCGGTGG CGCGACAAGT CTTGCAATTG AGCAGAACCT ACGATCTGCG GGTGATTGAA GATGATGTCT ACGCCGATCT GCACAATGGC AGCGGTACTC GTCTGGCCGC GCTGGATGAC GGGGAGCGGG TGATCTATGT CGGCAGCTTT TCCAAGACGC TGAGCAGCTC GCTACGGGTC GGTTTTGTCT TGGCCAGTGA CAAACTGATC GAGCGTATGG CGCGGGTCAA GATGATCAGT TGCATGGGCA CCTCGAGGTT CTGCGAGGCG GTTCTGGCCG GATTGCTGGC CAGTGGTGCC TATCGAAAAC TGGTACAGCG TCAGCGTCAG CGACTTTCCA CTGATCGTGT GGCTGCCCTT CAGGCGCTGG AGGACGCTGA CTGGGAGGTG TTCGGCAAGC CCACGGGCGG CCTGTTCATC TGGGCACGTT CGCCAGTGGC CGATGAGACA CGTTTGCGCG GGCATGCTCT ACGCTGCGGT GTTCAGTTGT CCTGCGCAAC GTCGTTCAGT CCCAGTGGCG AAGCCTGCGA CTGGCAGCGG ATCAACGTGG CTTACGCCTG TGATCCACGG GCACGGCAGT TTTTTCGCGA TACAGCCATG GATCGACCTC GAACGTTCTG A
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Protein sequence | MELRIDRQAM VPVVQQIVDG LTEWIVQEQV PPTTRLPSVR QIARRNLLSQ SCVMEACERL VAQGILASRQ GSGFMVAALL PDYCRGSNGS EAGDEQHGRV TQSPWRGGLK LGAGVLPESW REPDDLSYAI RQVARADMAS LFNYNDPLGL PALREQIAKR LGLLDIKALD EQVLTTAGAS HALDLIMRTL FKAGDCVVVE TPGHAPLFEL LRLHGIRMLE VRRTPSGPDI EALEALLQQF RPTALFINSH HHNPTGSCLA PAVARQVLQL SRTYDLRVIE DDVYADLHNG SGTRLAALDD GERVIYVGSF SKTLSSSLRV GFVLASDKLI ERMARVKMIS CMGTSRFCEA VLAGLLASGA YRKLVQRQRQ RLSTDRVAAL QALEDADWEV FGKPTGGLFI WARSPVADET RLRGHALRCG VQLSCATSFS PSGEACDWQR INVAYACDPR ARQFFRDTAM DRPRTF
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