Gene Pfl01_4193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4193 
Symbol 
ID3717594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4733378 
End bp4734778 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content61% 
IMG OID 
ProductGntR family transcriptional regulator 
Protein accessionYP_349921 
Protein GI77460414 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTGA GAATTGACCG ACAGGCGATG GTGCCGGTTG TACAGCAGAT TGTTGACGGG 
TTGACCGAGT GGATCGTGCA GGAACAGGTG CCGCCGACGA CGCGGCTGCC CTCCGTACGA
CAGATCGCTC GACGCAATCT GCTCAGCCAG TCCTGCGTCA TGGAGGCTTG CGAGCGTCTG
GTGGCGCAGG GAATTCTGGC GTCGCGCCAG GGCTCGGGAT TCATGGTGGC GGCGTTGTTG
CCGGATTATT GCCGGGGGAG TAATGGCTCC GAGGCAGGCG ACGAGCAGCA CGGTCGCGTT
ACGCAATCGC CCTGGCGCGG CGGATTGAAG CTGGGCGCTG GTGTCCTGCC GGAGAGTTGG
CGTGAGCCGG ATGATCTGAG TTATGCGATC CGACAGGTGG CGCGCGCCGA TATGGCCAGC
CTGTTCAACT ACAACGACCC CCTCGGTCTT CCGGCGTTGC GGGAGCAGAT TGCCAAGCGT
CTCGGATTGC TGGATATCAA GGCCCTCGAT GAACAGGTGC TGACGACTGC CGGTGCCAGC
CACGCTCTGG ACCTGATCAT GCGGACCCTG TTCAAGGCCG GCGATTGCGT GGTGGTCGAA
ACGCCCGGAC ATGCGCCGCT GTTCGAACTT TTGCGCTTGC ACGGCATTCG CATGCTGGAG
GTGCGCCGCA CTCCGAGCGG TCCGGACATC GAAGCGCTCG AGGCGTTACT GCAACAGTTC
AGGCCGACAG CGCTGTTCAT CAACAGTCAT CACCACAATC CCACGGGCAG TTGCCTGGCG
CCGGCGGTGG CGCGACAAGT CTTGCAATTG AGCAGAACCT ACGATCTGCG GGTGATTGAA
GATGATGTCT ACGCCGATCT GCACAATGGC AGCGGTACTC GTCTGGCCGC GCTGGATGAC
GGGGAGCGGG TGATCTATGT CGGCAGCTTT TCCAAGACGC TGAGCAGCTC GCTACGGGTC
GGTTTTGTCT TGGCCAGTGA CAAACTGATC GAGCGTATGG CGCGGGTCAA GATGATCAGT
TGCATGGGCA CCTCGAGGTT CTGCGAGGCG GTTCTGGCCG GATTGCTGGC CAGTGGTGCC
TATCGAAAAC TGGTACAGCG TCAGCGTCAG CGACTTTCCA CTGATCGTGT GGCTGCCCTT
CAGGCGCTGG AGGACGCTGA CTGGGAGGTG TTCGGCAAGC CCACGGGCGG CCTGTTCATC
TGGGCACGTT CGCCAGTGGC CGATGAGACA CGTTTGCGCG GGCATGCTCT ACGCTGCGGT
GTTCAGTTGT CCTGCGCAAC GTCGTTCAGT CCCAGTGGCG AAGCCTGCGA CTGGCAGCGG
ATCAACGTGG CTTACGCCTG TGATCCACGG GCACGGCAGT TTTTTCGCGA TACAGCCATG
GATCGACCTC GAACGTTCTG A
 
Protein sequence
MELRIDRQAM VPVVQQIVDG LTEWIVQEQV PPTTRLPSVR QIARRNLLSQ SCVMEACERL 
VAQGILASRQ GSGFMVAALL PDYCRGSNGS EAGDEQHGRV TQSPWRGGLK LGAGVLPESW
REPDDLSYAI RQVARADMAS LFNYNDPLGL PALREQIAKR LGLLDIKALD EQVLTTAGAS
HALDLIMRTL FKAGDCVVVE TPGHAPLFEL LRLHGIRMLE VRRTPSGPDI EALEALLQQF
RPTALFINSH HHNPTGSCLA PAVARQVLQL SRTYDLRVIE DDVYADLHNG SGTRLAALDD
GERVIYVGSF SKTLSSSLRV GFVLASDKLI ERMARVKMIS CMGTSRFCEA VLAGLLASGA
YRKLVQRQRQ RLSTDRVAAL QALEDADWEV FGKPTGGLFI WARSPVADET RLRGHALRCG
VQLSCATSFS PSGEACDWQR INVAYACDPR ARQFFRDTAM DRPRTF