| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4184 |
|---|
| Symbol | fadE |
|---|
| ID | 3712548 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 4720690 |
|---|
| End bp | 4723137 |
|---|
| Gene Length | 2448 bp |
|---|
| Protein Length | 815 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | acyl-CoA dehydrogenase |
|---|
| Protein accession | YP_349912 |
|---|
| Protein GI | 77460405 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTTGT TGTGGATACT GGTTCTGATC GTCGGCGTGG CGTATCTGGC CCACCGGCGC
ATCGCCCCGC TGCCGGCACT GGGTATCGTC GCCGCTTACC TGTTGGCGAT GGGGATTTTC
AGCCACGCAC CGGGCTGGTT GCTGCTGATT TTCTGGGTCG TGCTGGCCCT GGTGGCCGTC
CCGCTGCTGT TGCCTGACCT GCGCCGCAAA CACTTTACCG CGCCGCTGTT CAGCTGGTTC
CAGAAAACCC TGCCACCGAT GTCGCAGACC GAACGCGACG CGATCGACGC CGGCACGGTG
TGGTGGGACG GCGAACTGTT CAGCGGCCGC CCGGACTGGG ACAAGCTGCT GTCCTATCCC
AAGGTGCAAC TGAGCGAAGA GGAACAGGCG TTCATCGACG GCCCGACCGA AGAACTCTGC
GCGATGGTCA CCGACTGGCA GATCGGCCAG TCGATGGACT TGCCGGCCGA AGCCTGGACC
CACATCAAGG AACACGGTTT CTTCGCCCTG ATCATTCCCA AGGAGTTCGG CGGCAAGGGT
TTTTCCGCCT ACGCCCACTC CCAGGTGGCG ATGAAACTGG CGACCCGCAG CGGCGACCTC
GCCTCCACCG TGATGGTGCC CAACTCCCTC GGCCCGGCCG AACTGCTGCT GCATTACGGC
ACCGACGAAC AACGCAATCA TTACCTGCCA CGGCTGGCCC GGGGCGACGA TATTCCGTGC
TTTGCGCTGA CCGGCCCGCT CGCCGGTTCA GACGCGGGCG CCATGCCCGA CACCGGGATC
ATCTGCAAAG GCGTATGGGA AGGCCAGGAA ACCCTCGGCC TGCGCCTGAA CTGGGAAAAA
CGCTACATCA CCCTCGGCCC GGTCGCGACC TTGCTCGGCC TGGCCTTCAA GGCCTATGAC
CCGGATCACC TGCTCGGCGA CAAAGAAGAC CTCGGCATCA GCCTCGCGCT GATCCCGACC
GATACTCCCG GCGTGGAAAT CGGTCGCCGC CACCTGCCGC TGGGCGCCGC GTTCATGAAC
GGCCCCAACT CCGGCAAGAA CGTGTTCATC CCGCTGGACT ACCTCATCGG CGGCCAGGAC
ATGCTCGGCA AAGGCTGGAT GATGCTGATG AACTGCCTGT CGGTCGGGCG TTCGATCTCG
CTGCCGGCAG TGGGTACCGG CGCGGCCAAG TTCACCAGTC TGGTGACCGG GCAATACGCG
CAGATTCGCG AGCAGTTCAA CGTGCCACTG TCAGCGTTCG AAGGCATTCA GGAAGCCATG
GCGCGGATCG GCGGCAACGC CTGGATGATG GACGCCGCAC GAATGCTGAC TGCCAATGCG
GTGGATCTGG GCGAGAAACC TTCTGTGCTG TCGGCGATCC TCAAATATCA CCTCACCGAA
CGCGGTCGCG AGTGCATCAG CCACGCCATG GACGTGCACG GCGGCAAGGC GATCATCATG
GGCCCGAACA ACTACCTGGG CCGCAGCTGG AACGGCGCGC CGATCTTCAT CACCGTGGAA
GGCGCGAACA TTCTTTCGCG CAACCTGATG ATCTTCGGCC AGGGCGCCAT CCGCTGCCAT
CCGTTCGTGC TCAAGGAAAT GGCCCTCGCC GGACGCGAGG ACAAGGACCA GGCGCTCAAG
GAATTCGATG GCCTGCTGCT CAAGCACATC GGATTTGCCG TGAGCAACGC CGCCAGCACG
CTGATGCTGA ACCTCGGCTT CGGTCATTTC GAACATGCAC CGGGAGACAA GCTCAGCCAA
GGTTACTTCC GCGCTCTCAA CCGTCAGGCT GCCGCGTTTG CCATGCTCGC CGACCTGAGC
ATGATGCTGC TGGGTGGCGA GCTGAAACGG CGCGAGCGTT TGTCGGCGCG TCTAGGTGAT
GTGCTGAGCA ACCTGTATCT GGCCTCGGCG GCGCTCAAGC GTTACCACGA CCTCGATTCC
CCGGCGTACA TGGAACCGCT GTTCCGATGG GCCATGGAAG AAAGCCTCGG CCAGTCGGAA
AAAGCGCTGG ATGAACTGCT GACCAACTTC CCGAACCGAG TCTTTGGCTG CCTGCTGCGC
GTGATCGTGT TCCCGTTCGG TCGCCGTCAC AAAGGCCCGT CGGACAGACT CGGCGCCGAA
GTGGCTGCGG TCATCGGCCG GGCCAAGGGC GATCCGGCGC TGGAAGAACT GCTTGCCGGC
TGCTATCGCC CGCAATCGGC CGACGATGCG GTCGGTGCTC TGCAACACGC CTGCGATCAG
TTGAACGCTG CGCAACCGCT GCACAAAAAG CTGCACACGT CGCTCAAGAG CGGTCAGGTC
AAACCGGTTG CCGGCGAACA CGCCATCGAT GCCGCACTGG AGGCCGGGGT GTTGCAGGCC
GTGGAAGCCC AGACCCTGCG TGATGCCGAA GCGGCGCGGC GCAAGGTGAT CGATGTCGAT
GATTTCGACA AGGAGCAACT GAAACCGGCG GACGGCAAAA TCCGCTGA
|
|---|
| Protein sequence | MLLLWILVLI VGVAYLAHRR IAPLPALGIV AAYLLAMGIF SHAPGWLLLI FWVVLALVAV
PLLLPDLRRK HFTAPLFSWF QKTLPPMSQT ERDAIDAGTV WWDGELFSGR PDWDKLLSYP
KVQLSEEEQA FIDGPTEELC AMVTDWQIGQ SMDLPAEAWT HIKEHGFFAL IIPKEFGGKG
FSAYAHSQVA MKLATRSGDL ASTVMVPNSL GPAELLLHYG TDEQRNHYLP RLARGDDIPC
FALTGPLAGS DAGAMPDTGI ICKGVWEGQE TLGLRLNWEK RYITLGPVAT LLGLAFKAYD
PDHLLGDKED LGISLALIPT DTPGVEIGRR HLPLGAAFMN GPNSGKNVFI PLDYLIGGQD
MLGKGWMMLM NCLSVGRSIS LPAVGTGAAK FTSLVTGQYA QIREQFNVPL SAFEGIQEAM
ARIGGNAWMM DAARMLTANA VDLGEKPSVL SAILKYHLTE RGRECISHAM DVHGGKAIIM
GPNNYLGRSW NGAPIFITVE GANILSRNLM IFGQGAIRCH PFVLKEMALA GREDKDQALK
EFDGLLLKHI GFAVSNAAST LMLNLGFGHF EHAPGDKLSQ GYFRALNRQA AAFAMLADLS
MMLLGGELKR RERLSARLGD VLSNLYLASA ALKRYHDLDS PAYMEPLFRW AMEESLGQSE
KALDELLTNF PNRVFGCLLR VIVFPFGRRH KGPSDRLGAE VAAVIGRAKG DPALEELLAG
CYRPQSADDA VGALQHACDQ LNAAQPLHKK LHTSLKSGQV KPVAGEHAID AALEAGVLQA
VEAQTLRDAE AARRKVIDVD DFDKEQLKPA DGKIR
|
|---|
| |