Gene Pfl01_4176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4176 
Symbol 
ID3712540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4713181 
End bp4713609 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content59% 
IMG OID 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_349904 
Protein GI77460397 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0268987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.49506 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAATTCC GTCGCAAGCC CCGGGAAACC ATCGACATCA ACCTCGCGTC GCTGATTGAC 
GTGGTGTTCA TCCTGTTGCT GTTTTTCGTC GTGACCACCA CCTTCACCCG TGAAACCCAG
TTGCGCGTCG ATCTGCCGGA AGCGGTCAGC GGTTCGCCGG CCGAGGATCA GCAGGTCAAG
CAACTGGACG TGGCCATCAG CGCCGAAGGC GTGTTCTCGG TGAACAACAA GATTCTGCCG
AAGAACGATC TGGCGACCCT GATGGAAGCC ATGCAGAAAG AAGCCAACGG CGACACCAAC
ATGCCGTTGT CAATCAGTGC TGACGGCAAG ACTCAGCACC AATCCGTGAT CACCGCCATG
GACGCGGCCG GCAAGCTCGG TTTCAGCCAT CTGCGCATGA CCACGGTCGA GGCGGCGCCC
AAATCCTGA
 
Protein sequence
MKFRRKPRET IDINLASLID VVFILLLFFV VTTTFTRETQ LRVDLPEAVS GSPAEDQQVK 
QLDVAISAEG VFSVNNKILP KNDLATLMEA MQKEANGDTN MPLSISADGK TQHQSVITAM
DAAGKLGFSH LRMTTVEAAP KS