Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4144 |
Symbol | |
ID | 3712626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4683354 |
End bp | 4684070 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | GntR family transcriptional regulator |
Protein accession | YP_349872 |
Protein GI | 77460365 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.278058 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAGCA GTTTTCACGC ATCAACGGTT GACTGGCTGG GCGCCTGGAT TGCTGCCGGC CAGGTGAAGC CGGGGCAGGC GATCAAGGTC GAGGCCGATC TGGGCGAGCA GCTCGGGGTC AGCCGCACCG TGATCCGCGA AGCCATCAAG ACTCTGGTCG CCAAAGGCAT GCTCGAAGTC GGGCCGAAAG TCGGCACGCG GGTGCTGCCG ATCAAGCGCT GGAACCTGTT CGATCCGCAA GTCGTGGGCT GGCTGTCACG CAGCGGCCTG CCGGAAAATT TCGTCGATGA CCTGCTCGAC CTGCGCCGCA CCATCGAACC GATGGCGGTG CGCTGGGCCT GCGAGCGGGC GACCGTTGAA CAGGTGCAAG CCGTGCGGCA GGCCTACAAC GCGCTGGAAC GGGCGGTCGA CAGCGGCATC GATTACAACC GCGCCGACCA GTTCTTCCAC GAGTGCATTC TCGCCGCCAG CCACAATCAA TTCATCGAAC AAATGGTGCC GGCCCTCGGT GCGCTGCTCG CCGTGTCCTT CGAAGTCTCG GCGGCCGATC CCGACGAATT GCGCCGCACA CTGCCTATCC ATAAAGACAT GGCCGATGCC ATCGCCGCCC GGGATGCCGC GCGGGGGGTG TGGGCCTGCA TGACCCTGAT CGACAATGCC AACCTGGCCA TCAAGCGGTT CTACCCGCAG GTGATGGCCG ACAAGAAAGC CAGCTGA
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Protein sequence | MSSSFHASTV DWLGAWIAAG QVKPGQAIKV EADLGEQLGV SRTVIREAIK TLVAKGMLEV GPKVGTRVLP IKRWNLFDPQ VVGWLSRSGL PENFVDDLLD LRRTIEPMAV RWACERATVE QVQAVRQAYN ALERAVDSGI DYNRADQFFH ECILAASHNQ FIEQMVPALG ALLAVSFEVS AADPDELRRT LPIHKDMADA IAARDAARGV WACMTLIDNA NLAIKRFYPQ VMADKKAS
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