Gene Pfl01_4144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4144 
Symbol 
ID3712626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4683354 
End bp4684070 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content64% 
IMG OID 
ProductGntR family transcriptional regulator 
Protein accessionYP_349872 
Protein GI77460365 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.278058 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAGCA GTTTTCACGC ATCAACGGTT GACTGGCTGG GCGCCTGGAT TGCTGCCGGC 
CAGGTGAAGC CGGGGCAGGC GATCAAGGTC GAGGCCGATC TGGGCGAGCA GCTCGGGGTC
AGCCGCACCG TGATCCGCGA AGCCATCAAG ACTCTGGTCG CCAAAGGCAT GCTCGAAGTC
GGGCCGAAAG TCGGCACGCG GGTGCTGCCG ATCAAGCGCT GGAACCTGTT CGATCCGCAA
GTCGTGGGCT GGCTGTCACG CAGCGGCCTG CCGGAAAATT TCGTCGATGA CCTGCTCGAC
CTGCGCCGCA CCATCGAACC GATGGCGGTG CGCTGGGCCT GCGAGCGGGC GACCGTTGAA
CAGGTGCAAG CCGTGCGGCA GGCCTACAAC GCGCTGGAAC GGGCGGTCGA CAGCGGCATC
GATTACAACC GCGCCGACCA GTTCTTCCAC GAGTGCATTC TCGCCGCCAG CCACAATCAA
TTCATCGAAC AAATGGTGCC GGCCCTCGGT GCGCTGCTCG CCGTGTCCTT CGAAGTCTCG
GCGGCCGATC CCGACGAATT GCGCCGCACA CTGCCTATCC ATAAAGACAT GGCCGATGCC
ATCGCCGCCC GGGATGCCGC GCGGGGGGTG TGGGCCTGCA TGACCCTGAT CGACAATGCC
AACCTGGCCA TCAAGCGGTT CTACCCGCAG GTGATGGCCG ACAAGAAAGC CAGCTGA
 
Protein sequence
MSSSFHASTV DWLGAWIAAG QVKPGQAIKV EADLGEQLGV SRTVIREAIK TLVAKGMLEV 
GPKVGTRVLP IKRWNLFDPQ VVGWLSRSGL PENFVDDLLD LRRTIEPMAV RWACERATVE
QVQAVRQAYN ALERAVDSGI DYNRADQFFH ECILAASHNQ FIEQMVPALG ALLAVSFEVS
AADPDELRRT LPIHKDMADA IAARDAARGV WACMTLIDNA NLAIKRFYPQ VMADKKAS