Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4098 |
Symbol | mnmC |
ID | 3712402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4634886 |
End bp | 4636865 |
Gene Length | 1980 bp |
Protein Length | 659 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | 5-methylaminomethyl-2-thiouridine methyltransferase |
Protein accession | YP_349826 |
Protein GI | 77460319 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCTG TAATGCCCCA CGCCCAACTC GACTGGGATG ACCAGGGACG CCCGCGTTCG CGAGTGTTCG ACGATGTGTA TTTTTCCGAC CAGTCGGGGC TGGATGAAAC CCGCTACGTG TTCCTTGAAC AGAACCGTCT GGCCGAGCGT TTTGCCGCGT TGTCGGCGGG TGGGCGACTG GTGATCGGTG AAACCGGCTT CGGCACCGGG CTGAATTTTC TCTGCGCCTG GCAGTTGTTC GAACAGCACG CGGTGGCCGG TGCGCGACTG CATTTTGTCA GCGTCGAAAA ATTTCCGTTG AGCCCTGCCG ACCTGCAACG GGCGCTGGCG TTGTGGCCCG ACCTGAAGCG ATTCTCCGAT CAGTTGCTCA AGCATTACGT GGCAATCCAT CAGGGATTTC AGCGCATTGT TCTGGATAAC GGGCGCATAA CCCTGACCCT GTTGATCGGT GACGCGCTGG AGCAGTTGCC ACAACTGGAC GGCCAGATCG ACGCCTGGTT TCTCGACGGT TTCGCGCCAG CGAAAAACCC CGAGATGTGG ACCGCCGAAC TGTTCGCCGA ACTGGCCCGG CTGGCGGCAC CCGGCTCGAC CATCAGCACG TTTACCAGCA CCGGTTGGGT GCGACGCCTG CTCAACGCCG CCGGCTTCAA GATGAAACGC ACGCCGGGCA TCGGCCACAA ATGGGAAATC CTGCGCGGCG AATTTCTCGG CTGGCCCGAG GGTGTTGCGC CACCTGCGGC GGCAAAACCG TGGTTCGCCC GCCCCACACG GTTGACAGGT GACCGTCGAG CCCTGGTGAT CGGCGCCGGT CTGGCCGGTT GCGCCACGGC GGCCAGCCTC GCGGCGCGGG GCTGGCAGGT CAGTCTGCTG GAACGGCATG ATGCGGTGGC CCAGGAAGCC TCGGGTAACC CGCAAGGCGT TCTGTATCTG AAACTGTCCG CCCATGGCAC GGCACTTTCG CAGTTGATCG TCAGCGGTTT CGGTTACACC CGGCGCGTGC TGGAAACCTT GCAGCGTGGC ACCGACTGGG ATGATTGCGG GGTGCTGCAA CTGGCGTTCA ATGAGAAGGA GCGCGAGCGT CAGGCACAAC TGGCATCCGC GTTTCCCGAA GACCTGCTGC AATGGCTCGA TCAACCCGAA GCGCAGGCCC GTGCCGGAGT CGGTCTGGCT CACGGCGGTT TGTATTACCC CGAGGGTGGC TGGGTACATC CGCCGGCGTT GTGTCAGGCG CAATCGGCAC AGCCGGGCGT CACACTGCTC CCCCATCAGG AAGCCGTCGA GTTGCGCAAA GTGGGCGATC AATGGCAAGC CTTCGACGGT GAACGATTGA TTGCAACAGC GCCCGTCGTG GTGCTGGCCG GTGCCGCCGA AATCAAGCGT TTTGCCCAAA GCGGCGAGCT GCCCCTCAAG CGCATTCGCG GGCAGATCAC CCGCCTGGCG CAGACTGCGC AAAGCCAGGC GCTGGCCACT GTCGTGTGTG CCGAAGGTTA TGTCGCACCG GCACGATGGG GCGAGCACAC CCTCGGCGCC AGTTTCGACT TCAGCAGCGA CGACCTGACC CCGACCACCG CCGAACACCT GGGCAATCTG GCGATGCTCG AAGAGATCTC CACCGATCTG GTCGCGCGCC TGCACGTCAG CGAGCGCGAC GCCGAAAGTC TTCAGGGCCG GGCAGCCTTC CGTTGCACCA GCCCCGATTA CCTGCCGATG GTCGGCCCGC TCGCCGACCG CGAAGCGTTT ACCCGGATCT ACGCCGCATT GAGCAAGGAT GCACGGCAGG TGCCGGACAT GCCTTGTCCC TGGCTCGACG GACTGTACGT CAACAGCGGT CATGGCTCCC GAGGTCTGAT CACCGCACCC TTGTCCGGTG AACTGCTCGC GGCCTGGCTG GACAACGAAC CGCTGCCCCT GCCCAGAAGT GTCGCAGAGG CGTGTCATCC GAACCGGTTT GCCTTGCGGC GACTGATCCG GGGCAAATGA
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Protein sequence | MKPVMPHAQL DWDDQGRPRS RVFDDVYFSD QSGLDETRYV FLEQNRLAER FAALSAGGRL VIGETGFGTG LNFLCAWQLF EQHAVAGARL HFVSVEKFPL SPADLQRALA LWPDLKRFSD QLLKHYVAIH QGFQRIVLDN GRITLTLLIG DALEQLPQLD GQIDAWFLDG FAPAKNPEMW TAELFAELAR LAAPGSTIST FTSTGWVRRL LNAAGFKMKR TPGIGHKWEI LRGEFLGWPE GVAPPAAAKP WFARPTRLTG DRRALVIGAG LAGCATAASL AARGWQVSLL ERHDAVAQEA SGNPQGVLYL KLSAHGTALS QLIVSGFGYT RRVLETLQRG TDWDDCGVLQ LAFNEKERER QAQLASAFPE DLLQWLDQPE AQARAGVGLA HGGLYYPEGG WVHPPALCQA QSAQPGVTLL PHQEAVELRK VGDQWQAFDG ERLIATAPVV VLAGAAEIKR FAQSGELPLK RIRGQITRLA QTAQSQALAT VVCAEGYVAP ARWGEHTLGA SFDFSSDDLT PTTAEHLGNL AMLEEISTDL VARLHVSERD AESLQGRAAF RCTSPDYLPM VGPLADREAF TRIYAALSKD ARQVPDMPCP WLDGLYVNSG HGSRGLITAP LSGELLAAWL DNEPLPLPRS VAEACHPNRF ALRRLIRGK
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