Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4076 |
Symbol | |
ID | 3712321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4605441 |
End bp | 4606535 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | prephenate dehydratase |
Protein accession | YP_349804 |
Protein GI | 77460297 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.000787581 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.246318 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAGC AGGAGCTCAA GGCGCTGCGC GTTCGCATCG ATAACCTGGA TGAGAAGATC CTCCAGCTGA TCAGCGATCG CGCGCGCTGC GCCGAAGAAG TTGCCCGGGT CAAGATGGCC AGTCTGGCCG AAGGCGAGCA GCCCGTGTTC TATCGTCCCG AGCGTGAGGC GCAGGTCCTT AAGCGCGTGA TGGAGCGCAA CAAGGGACCA CTGGGCAACG AAGAGATGGC GCGCTTGTTC CGCGAAATCA TGTCTTCGTG CCTGGCCCTC GAGAACCCGC TGAAAGTGGC TTATCTCGGT CCGGAAGGCA CCTTCACCCA GGCGGCGGCC ATGAAGCACT TCGGTCACGC GGTGATCAGC AAGCCGATGG CGGCGATCGA CGAAGTGTTC CGTGAAGTGG CGGCCGGTGC GGTGAACTTT GGCGTGGTGC CGGTGGAGAA CTCCACCGAA GGCGCGGTCA ACCACACCCT CGACAGCTTC CTCGAGCACG ACATGGTGAT CTGCGGCGAA GTCGAGCTGC GCATTCACCA CCACCTGCTG GTCGGTGAAA ACACCAAGAC CGACAGCATC AGCCGTATCT ATTCCCACGC CCAGTCGCTG GCCCAGTGCC GCAAATGGCT GGACGCCCAT TATCCGAATG TCGAGCGCGT GGCGGTTTCC AGCAACGCCG AGGCGGCCAA GCGGGTCAAG GGCGAATGGA ACTCGGCGGC GATCGCCGGT GACATGGCGG CCGGGCTCTA TGGCCTGACC CGTCTGGCCG AGAAGATCGA GGATCGCCCG GACAACTCCA CGCGCTTCCT GATGATCGGT AATCAGGAAG TGCCGCCGAC CGGCGATGAC AAGACTTCGA TCATCGTGTC CATGAGCAAC AAGCCCGGCG CTCTCCACGA GCTGCTGGTG CCGTTCCATG ACAACGGGAT CGACCTGACC CGGATCGAAA CCCGTCCGTC GCGCAGCGGC AAATGGACCT ACGTGTTTTT CATCGACTTC GTGGGCCATC ACCGTGATCC GCTGATCAAG GGTGTACTGG AAAAGATCAG TCAGGAAGCA GTAGCACTCA AGGTGCTGGG TTCCTACCCG AAAGCAGTTC TTTAA
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Protein sequence | MSEQELKALR VRIDNLDEKI LQLISDRARC AEEVARVKMA SLAEGEQPVF YRPEREAQVL KRVMERNKGP LGNEEMARLF REIMSSCLAL ENPLKVAYLG PEGTFTQAAA MKHFGHAVIS KPMAAIDEVF REVAAGAVNF GVVPVENSTE GAVNHTLDSF LEHDMVICGE VELRIHHHLL VGENTKTDSI SRIYSHAQSL AQCRKWLDAH YPNVERVAVS SNAEAAKRVK GEWNSAAIAG DMAAGLYGLT RLAEKIEDRP DNSTRFLMIG NQEVPPTGDD KTSIIVSMSN KPGALHELLV PFHDNGIDLT RIETRPSRSG KWTYVFFIDF VGHHRDPLIK GVLEKISQEA VALKVLGSYP KAVL
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