Gene Pfl01_4076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4076 
Symbol 
ID3712321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4605441 
End bp4606535 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content61% 
IMG OID 
Productprephenate dehydratase 
Protein accessionYP_349804 
Protein GI77460297 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000787581 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.246318 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGC AGGAGCTCAA GGCGCTGCGC GTTCGCATCG ATAACCTGGA TGAGAAGATC 
CTCCAGCTGA TCAGCGATCG CGCGCGCTGC GCCGAAGAAG TTGCCCGGGT CAAGATGGCC
AGTCTGGCCG AAGGCGAGCA GCCCGTGTTC TATCGTCCCG AGCGTGAGGC GCAGGTCCTT
AAGCGCGTGA TGGAGCGCAA CAAGGGACCA CTGGGCAACG AAGAGATGGC GCGCTTGTTC
CGCGAAATCA TGTCTTCGTG CCTGGCCCTC GAGAACCCGC TGAAAGTGGC TTATCTCGGT
CCGGAAGGCA CCTTCACCCA GGCGGCGGCC ATGAAGCACT TCGGTCACGC GGTGATCAGC
AAGCCGATGG CGGCGATCGA CGAAGTGTTC CGTGAAGTGG CGGCCGGTGC GGTGAACTTT
GGCGTGGTGC CGGTGGAGAA CTCCACCGAA GGCGCGGTCA ACCACACCCT CGACAGCTTC
CTCGAGCACG ACATGGTGAT CTGCGGCGAA GTCGAGCTGC GCATTCACCA CCACCTGCTG
GTCGGTGAAA ACACCAAGAC CGACAGCATC AGCCGTATCT ATTCCCACGC CCAGTCGCTG
GCCCAGTGCC GCAAATGGCT GGACGCCCAT TATCCGAATG TCGAGCGCGT GGCGGTTTCC
AGCAACGCCG AGGCGGCCAA GCGGGTCAAG GGCGAATGGA ACTCGGCGGC GATCGCCGGT
GACATGGCGG CCGGGCTCTA TGGCCTGACC CGTCTGGCCG AGAAGATCGA GGATCGCCCG
GACAACTCCA CGCGCTTCCT GATGATCGGT AATCAGGAAG TGCCGCCGAC CGGCGATGAC
AAGACTTCGA TCATCGTGTC CATGAGCAAC AAGCCCGGCG CTCTCCACGA GCTGCTGGTG
CCGTTCCATG ACAACGGGAT CGACCTGACC CGGATCGAAA CCCGTCCGTC GCGCAGCGGC
AAATGGACCT ACGTGTTTTT CATCGACTTC GTGGGCCATC ACCGTGATCC GCTGATCAAG
GGTGTACTGG AAAAGATCAG TCAGGAAGCA GTAGCACTCA AGGTGCTGGG TTCCTACCCG
AAAGCAGTTC TTTAA
 
Protein sequence
MSEQELKALR VRIDNLDEKI LQLISDRARC AEEVARVKMA SLAEGEQPVF YRPEREAQVL 
KRVMERNKGP LGNEEMARLF REIMSSCLAL ENPLKVAYLG PEGTFTQAAA MKHFGHAVIS
KPMAAIDEVF REVAAGAVNF GVVPVENSTE GAVNHTLDSF LEHDMVICGE VELRIHHHLL
VGENTKTDSI SRIYSHAQSL AQCRKWLDAH YPNVERVAVS SNAEAAKRVK GEWNSAAIAG
DMAAGLYGLT RLAEKIEDRP DNSTRFLMIG NQEVPPTGDD KTSIIVSMSN KPGALHELLV
PFHDNGIDLT RIETRPSRSG KWTYVFFIDF VGHHRDPLIK GVLEKISQEA VALKVLGSYP
KAVL