Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4075 |
Symbol | |
ID | 3712320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4604316 |
End bp | 4605428 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | histidinol-phosphate aminotransferase |
Protein accession | YP_349803 |
Protein GI | 77460296 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000427384 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.244863 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGGCA ACTTCCTCGC TCTGGCACAG CCGGGCGTGC AGCAACTTTC GCCATACGTG CCGGGCAAGC CCGTGGACGA ACTGGCCCGC GAGCTGGACC TGGATCCGGC AAGTATCGTC AAACTGGCGA GCAACGAAAA CCCGTTGGGC GCGAGCCCGA AAGCGCTGGC CGCGATCCGC GAGGCGCTGG ACGAACTGAC CCGCTATCCG GACGGTAACG GTTTCGCACT GAAATCCCTG CTGGCCGAGC AGTGCCGTGT CGAGCTGAAC CAAGTGACTT TGGGCAACGG TTCCAACGAC ATTCTCGAGC TGGTGGCGCG CGCCTATCTG GCGCCGGGCC TGAATGCGGT GTTCAGCGAG CACGCGTTCG CGGTTTACCC GATCGCGACC CAGGCAGTCG GCGCTCAGGC CAAGGTCGTT CCAGCCAAAG AGTGGGGGCA CGATTTGCCA GCGATGCTGG CGGCCATCGA TGCGAACACC CGTGTCGTGT TCATCGCCAA CCCGAACAAC CCGACCGGTA CCTGGTTCGG CGCCGAAGCG CTGGACGACT TCCTGCAGGA CGTGCCAGAG CACGTGCTGG TGGTGCTGGA CGAGGCGTAC ATCGAATACG CCGAAGGCAG TGATCTGCCG GATGGTCTGG ACTTCCTCGC GGCTTATCCG AACCTGCTGG TCTCGCGCAC GTTCTCCAAG GCCTACGGTC TGGCGGCGCT GCGCGTCGGT TACGGCCTGT CCACCCCGGT GGTGGCGGAC GTGCTGAACC GTGTACGCCA GCCGTTCAAC GTCAACAGCC TGGCCCTGGC CGCGGCGTGT GCGGCGTTGA AAGACGAGGA ATATCTGGCG CAGAGCCGCC AGCTCAACGA ATCCGGCATG CAACAGCTGG AGGCGGGTTT TCGCGAGCTG GGTCTGAGCT GGATTCCGTC CAAGGGCAAC TTTATCTGCG TCGACCTTGG TCAGGTGGCG GCTCCGGTGT TCCAGGGCCT GCTGCGTGAA GGCGTGATTG TGCGTCCGGT GGCCAACTAC GGCATGCCGA ACCATCTGCG GGTGACCATC GGTCTGCCGG CGGAAAACAG CCGCTTCCTC GAAGCGCTGC GCAAGGTTCT GGCTCGTGGG TGA
|
Protein sequence | MSGNFLALAQ PGVQQLSPYV PGKPVDELAR ELDLDPASIV KLASNENPLG ASPKALAAIR EALDELTRYP DGNGFALKSL LAEQCRVELN QVTLGNGSND ILELVARAYL APGLNAVFSE HAFAVYPIAT QAVGAQAKVV PAKEWGHDLP AMLAAIDANT RVVFIANPNN PTGTWFGAEA LDDFLQDVPE HVLVVLDEAY IEYAEGSDLP DGLDFLAAYP NLLVSRTFSK AYGLAALRVG YGLSTPVVAD VLNRVRQPFN VNSLALAAAC AALKDEEYLA QSRQLNESGM QQLEAGFREL GLSWIPSKGN FICVDLGQVA APVFQGLLRE GVIVRPVANY GMPNHLRVTI GLPAENSRFL EALRKVLARG
|
| |